Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70482.1 | ABK70706.1 | MSMEG_5005 | MSMEG_5785 | LprC protein. | Probable exported protein. | 0.768 |
ABK70482.1 | ABK70936.1 | MSMEG_5005 | MSMEG_2333 | LprC protein. | Conserved hypothetical protein. | 0.771 |
ABK70482.1 | ABK71593.1 | MSMEG_5005 | MSMEG_5007 | LprC protein. | LprB protein. | 0.997 |
ABK70482.1 | ABK72090.1 | MSMEG_5005 | MSMEG_0923 | LprC protein. | Conserved hypothetical protein. | 0.771 |
ABK70482.1 | ABK72891.1 | MSMEG_5005 | MSMEG_0736 | LprC protein. | Conserved hypothetical protein. | 0.788 |
ABK70482.1 | ABK73452.1 | MSMEG_5005 | MSMEG_5205 | LprC protein. | Conserved hypothetical protein. | 0.757 |
ABK70482.1 | ABK74560.1 | MSMEG_5005 | MSMEG_0909 | LprC protein. | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | 0.774 |
ABK70482.1 | ABK75153.1 | MSMEG_5005 | MSMEG_1053 | LprC protein. | Conserved hypothetical protein. | 0.774 |
ABK70482.1 | ABK75913.1 | MSMEG_5005 | MSMEG_3144 | LprC protein. | Putative membrane protein. | 0.767 |
ABK70482.1 | aftC | MSMEG_5005 | MSMEG_2785 | LprC protein. | Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG. | 0.743 |
ABK70706.1 | ABK70482.1 | MSMEG_5785 | MSMEG_5005 | Probable exported protein. | LprC protein. | 0.768 |
ABK70706.1 | ABK70936.1 | MSMEG_5785 | MSMEG_2333 | Probable exported protein. | Conserved hypothetical protein. | 0.756 |
ABK70706.1 | ABK71593.1 | MSMEG_5785 | MSMEG_5007 | Probable exported protein. | LprB protein. | 0.760 |
ABK70706.1 | ABK72090.1 | MSMEG_5785 | MSMEG_0923 | Probable exported protein. | Conserved hypothetical protein. | 0.759 |
ABK70706.1 | ABK72891.1 | MSMEG_5785 | MSMEG_0736 | Probable exported protein. | Conserved hypothetical protein. | 0.776 |
ABK70706.1 | ABK73452.1 | MSMEG_5785 | MSMEG_5205 | Probable exported protein. | Conserved hypothetical protein. | 0.747 |
ABK70706.1 | ABK74560.1 | MSMEG_5785 | MSMEG_0909 | Probable exported protein. | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | 0.758 |
ABK70706.1 | ABK75153.1 | MSMEG_5785 | MSMEG_1053 | Probable exported protein. | Conserved hypothetical protein. | 0.761 |
ABK70706.1 | ABK75913.1 | MSMEG_5785 | MSMEG_3144 | Probable exported protein. | Putative membrane protein. | 0.726 |
ABK70706.1 | aftC | MSMEG_5785 | MSMEG_2785 | Probable exported protein. | Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG. | 0.512 |
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