Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70099.1 | ABK70243.1 | MSMEG_3225 | MSMEG_6459 | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | 0.999 |
ABK70099.1 | ABK70685.1 | MSMEG_3225 | MSMEG_0914 | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | Conserved hypothetical protein. | 0.458 |
ABK70243.1 | ABK70099.1 | MSMEG_6459 | MSMEG_3225 | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | 0.999 |
ABK70243.1 | ABK70685.1 | MSMEG_6459 | MSMEG_0914 | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | Conserved hypothetical protein. | 0.457 |
ABK70685.1 | ABK70099.1 | MSMEG_0914 | MSMEG_3225 | Conserved hypothetical protein. | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | 0.458 |
ABK70685.1 | ABK70243.1 | MSMEG_0914 | MSMEG_6459 | Conserved hypothetical protein. | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | 0.457 |
ABK70685.1 | ABK75180.1 | MSMEG_0914 | MSMEG_0916 | Conserved hypothetical protein. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.516 |
ABK70685.1 | ABK75905.1 | MSMEG_0914 | MSMEG_0915 | Conserved hypothetical protein. | Polyphosphate kinase 2 superfamily protein; Identified by match to protein family HMM PF03976. | 0.521 |
ABK75180.1 | ABK70685.1 | MSMEG_0916 | MSMEG_0914 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.516 |
ABK75180.1 | ABK75905.1 | MSMEG_0916 | MSMEG_0915 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Polyphosphate kinase 2 superfamily protein; Identified by match to protein family HMM PF03976. | 0.833 |
ABK75905.1 | ABK70685.1 | MSMEG_0915 | MSMEG_0914 | Polyphosphate kinase 2 superfamily protein; Identified by match to protein family HMM PF03976. | Conserved hypothetical protein. | 0.521 |
ABK75905.1 | ABK75180.1 | MSMEG_0915 | MSMEG_0916 | Polyphosphate kinase 2 superfamily protein; Identified by match to protein family HMM PF03976. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.833 |