STRINGSTRING
ABK73418.1 ABK73418.1 ABK74178.1 ABK74178.1 ABK74452.1 ABK74452.1 ABK72090.1 ABK72090.1 ABK70571.1 ABK70571.1 murB murB ABK70477.1 ABK70477.1 ABK75301.1 ABK75301.1 ABK74074.1 ABK74074.1 ABK69918.1 ABK69918.1 ABK72334.1 ABK72334.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73418.1Conserved hypothetical protein. (258 aa)    
Predicted Functional Partners:
ABK74178.1
Conserved hypothetical protein.
       0.829
ABK74452.1
Identified by match to protein family HMM PF00795.
  
    0.804
ABK72090.1
Conserved hypothetical protein.
  
    0.698
ABK70571.1
Conserved hypothetical protein.
  
    0.680
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
    0.618
ABK70477.1
Identified by match to protein family HMM PF03734.
  
    0.547
ABK75301.1
Transcriptional regulatory protein.
  
    0.499
ABK74074.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05114.
 
    0.497
ABK69918.1
Conserved hypothetical protein.
  
    0.485
ABK72334.1
Conserved hypothetical protein.
  
    0.476
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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