STRINGSTRING
ABK70390.1 ABK70390.1 ABK71558.1 ABK71558.1 ABK72650.1 ABK72650.1 ABK73961.1 ABK73961.1 ABK75992.1 ABK75992.1 rnz-2 rnz-2 ABK75054.1 ABK75054.1 ABK73438.1 ABK73438.1 mshA mshA mmsB mmsB gpmA gpmA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABK70390.1Serine 3-dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (249 aa)    
Predicted Functional Partners:
ABK71558.1
ROK family protein; Identified by match to protein family HMM PF00480.
  
    0.781
ABK72650.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.671
ABK73961.1
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02569.
  
  
 0.604
ABK75992.1
DHH family protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272.
   
  
 0.592
rnz-2
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA.
   
  
 0.591
ABK75054.1
Identified by match to protein family HMM PF00753.
      
 0.587
ABK73438.1
Conserved hypothetical protein.
  
    0.538
mshA
Conserved hypothetical protein; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway; Belongs to the glycosyltransferase group 1 family. MshA subfamily.
  
    0.533
mmsB
3-hydroxyisobutyrate dehydrogenase; Identified by match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR01692; Belongs to the HIBADH-related family.
  
  
 0.464
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
    0.463
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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