Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70110.1 | ABK72671.1 | MSMEG_2575 | MSMEG_0940 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.458 |
ABK70110.1 | ABK72891.1 | MSMEG_2575 | MSMEG_0736 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.756 |
ABK70110.1 | ABK74249.1 | MSMEG_2575 | MSMEG_1598 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.626 |
ABK70110.1 | ABK74426.1 | MSMEG_2575 | MSMEG_0942 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.618 |
ABK70110.1 | ABK75842.1 | MSMEG_2575 | MSMEG_4489 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.696 |
ABK70110.1 | octT | MSMEG_2575 | MSMEG_4578 | Conserved hypothetical protein. | Conserved hypothetical protein; Sugar octanoyltransferase likely involved in the biosynthesis of mycobacterial methylglucose lipopolysaccharide (MGLP). Catalyzes the transfer of an octanoyl group from octanoyl-CoA to the C6 OH of the second glucose in diglucosylglycerate (DGG). DGG is the preferred acceptor, but to a lesser extent, GG (glucosylglycerate) can also be used as substrate. DGG and GG are the two earliest intermediates in MGLP biosynthesis; Belongs to the OctT acyltransferase family. | 0.611 |
ABK70196.1 | ABK72565.1 | MSMEG_0939 | MSMEG_0941 | Identified by match to protein family HMM PF02541. | Identified by match to protein family HMM PF01261. | 0.823 |
ABK70196.1 | ABK72671.1 | MSMEG_0939 | MSMEG_0940 | Identified by match to protein family HMM PF02541. | Conserved hypothetical protein. | 0.850 |
ABK70196.1 | ABK74426.1 | MSMEG_0939 | MSMEG_0942 | Identified by match to protein family HMM PF02541. | Conserved hypothetical protein. | 0.796 |
ABK70196.1 | ABK75000.1 | MSMEG_0939 | MSMEG_0938 | Identified by match to protein family HMM PF02541. | Conserved hypothetical protein. | 0.658 |
ABK70196.1 | proC | MSMEG_0939 | MSMEG_0943 | Identified by match to protein family HMM PF02541. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.764 |
ABK72565.1 | ABK70196.1 | MSMEG_0941 | MSMEG_0939 | Identified by match to protein family HMM PF01261. | Identified by match to protein family HMM PF02541. | 0.823 |
ABK72565.1 | ABK72671.1 | MSMEG_0941 | MSMEG_0940 | Identified by match to protein family HMM PF01261. | Conserved hypothetical protein. | 0.825 |
ABK72565.1 | ABK74426.1 | MSMEG_0941 | MSMEG_0942 | Identified by match to protein family HMM PF01261. | Conserved hypothetical protein. | 0.936 |
ABK72565.1 | ABK75000.1 | MSMEG_0941 | MSMEG_0938 | Identified by match to protein family HMM PF01261. | Conserved hypothetical protein. | 0.629 |
ABK72565.1 | proC | MSMEG_0941 | MSMEG_0943 | Identified by match to protein family HMM PF01261. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.814 |
ABK72671.1 | ABK70110.1 | MSMEG_0940 | MSMEG_2575 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.458 |
ABK72671.1 | ABK70196.1 | MSMEG_0940 | MSMEG_0939 | Conserved hypothetical protein. | Identified by match to protein family HMM PF02541. | 0.850 |
ABK72671.1 | ABK72565.1 | MSMEG_0940 | MSMEG_0941 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01261. | 0.825 |
ABK72671.1 | ABK72891.1 | MSMEG_0940 | MSMEG_0736 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.743 |
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