Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70008.1 | ABK74527.1 | MSMEG_0950 | MSMEG_0948 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Belongs to the UPF0336 family. | 0.905 |
| ABK70008.1 | ABK74733.1 | MSMEG_0950 | MSMEG_0949 | Hypothetical protein; Identified by Glimmer2; putative. | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | 0.713 |
| ABK70008.1 | ABK75338.1 | MSMEG_0950 | MSMEG_0951 | Hypothetical protein; Identified by Glimmer2; putative. | Glutaredoxin 2; Identified by match to protein family HMM PF05768. | 0.919 |
| ABK72677.1 | ABK74733.1 | MSMEG_3422 | MSMEG_0949 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | 0.542 |
| ABK72677.1 | serC | MSMEG_3422 | MSMEG_5684 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | Phosphoserine aminotransferase, putative; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.723 |
| ABK73701.1 | ABK74733.1 | MSMEG_2496 | MSMEG_0949 | Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | 0.549 |
| ABK73701.1 | serC | MSMEG_2496 | MSMEG_5684 | Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoserine aminotransferase, putative; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.720 |
| ABK74527.1 | ABK70008.1 | MSMEG_0948 | MSMEG_0950 | Conserved hypothetical protein; Belongs to the UPF0336 family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.905 |
| ABK74527.1 | ABK74733.1 | MSMEG_0948 | MSMEG_0949 | Conserved hypothetical protein; Belongs to the UPF0336 family. | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | 0.799 |
| ABK74527.1 | ABK75338.1 | MSMEG_0948 | MSMEG_0951 | Conserved hypothetical protein; Belongs to the UPF0336 family. | Glutaredoxin 2; Identified by match to protein family HMM PF05768. | 0.925 |
| ABK74733.1 | ABK70008.1 | MSMEG_0949 | MSMEG_0950 | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | Hypothetical protein; Identified by Glimmer2; putative. | 0.713 |
| ABK74733.1 | ABK72677.1 | MSMEG_0949 | MSMEG_3422 | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | 0.542 |
| ABK74733.1 | ABK73701.1 | MSMEG_0949 | MSMEG_2496 | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.549 |
| ABK74733.1 | ABK74527.1 | MSMEG_0949 | MSMEG_0948 | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | Conserved hypothetical protein; Belongs to the UPF0336 family. | 0.799 |
| ABK74733.1 | ABK75338.1 | MSMEG_0949 | MSMEG_0951 | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | Glutaredoxin 2; Identified by match to protein family HMM PF05768. | 0.698 |
| ABK74733.1 | hisC | MSMEG_0949 | MSMEG_3206 | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | Histidinol-phosphate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.516 |
| ABK74733.1 | hisF | MSMEG_0949 | MSMEG_3211 | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.597 |
| ABK74733.1 | hisH | MSMEG_0949 | MSMEG_3208 | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.527 |
| ABK74733.1 | serA | MSMEG_0949 | MSMEG_2378 | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | D-3-phosphoglycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF01842; match to protein family HMM PF02826; match to protein family HMM TIGR01327; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.770 |
| ABK74733.1 | serC | MSMEG_0949 | MSMEG_5684 | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | Phosphoserine aminotransferase, putative; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.776 |
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