STRINGSTRING
ABK70008.1 ABK70008.1 ABK75338.1 ABK75338.1 ABK74527.1 ABK74527.1 ABK69550.1 ABK69550.1 ABK74733.1 ABK74733.1 ABK73836.1 ABK73836.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70008.1Hypothetical protein; Identified by Glimmer2; putative. (107 aa)    
Predicted Functional Partners:
ABK75338.1
Glutaredoxin 2; Identified by match to protein family HMM PF05768.
     
 0.919
ABK74527.1
Conserved hypothetical protein; Belongs to the UPF0336 family.
  
  
 0.905
ABK69550.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
   
  
 0.821
ABK74733.1
HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490.
  
    0.713
ABK73836.1
Identified by match to protein family HMM PF00795.
   
  
 0.593
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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