STRINGSTRING
ABK72379.1 ABK72379.1 ABK74808.1 ABK74808.1 hemD hemD hemC hemC ABK72687.1 ABK72687.1 ABK71621.1 ABK71621.1 ABK69526.1 ABK69526.1 ABK73297.1 ABK73297.1 ABK73452.1 ABK73452.1 ABK74323.1 ABK74323.1 ABK70648.1 ABK70648.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72379.1Putative conserved transmembrane protein. (164 aa)    
Predicted Functional Partners:
ABK74808.1
Putative transmembrane protein.
  
    0.955
hemD
uroporphyrinogen-III synthase; Identified by match to protein family HMM PF00590; match to protein family HMM PF02602.
  
    0.857
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
    0.823
ABK72687.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.815
ABK71621.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.808
ABK69526.1
LppL protein.
  
    0.756
ABK73297.1
Conserved hypothetical protein.
  
    0.730
ABK73452.1
Conserved hypothetical protein.
  
    0.726
ABK74323.1
Conserved hypothetical protein.
  
    0.721
ABK70648.1
Heparin-binding hemagglutinin.
  
    0.716
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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