Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70488.1 | ABK71851.1 | MSMEG_0962 | MSMEG_0963 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Hypothetical protein; Identified by Glimmer2; putative. | 0.624 |
| ABK70488.1 | ABK72113.1 | MSMEG_0962 | MSMEG_0964 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.557 |
| ABK71703.1 | ABK72113.1 | MSMEG_0651 | MSMEG_0964 | Putative conserved exported protein. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.553 |
| ABK71836.1 | ABK72113.1 | MSMEG_2246 | MSMEG_0964 | Conserved hypothetical protein. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.534 |
| ABK71851.1 | ABK70488.1 | MSMEG_0963 | MSMEG_0962 | Hypothetical protein; Identified by Glimmer2; putative. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.624 |
| ABK71851.1 | ABK72113.1 | MSMEG_0963 | MSMEG_0964 | Hypothetical protein; Identified by Glimmer2; putative. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.686 |
| ABK72094.1 | ABK72113.1 | MSMEG_4548 | MSMEG_0964 | Identified by match to protein family HMM PF00583. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.544 |
| ABK72094.1 | ABK76042.1 | MSMEG_4548 | MSMEG_4396 | Identified by match to protein family HMM PF00583. | Isochorismatase hydrolase; Identified by match to protein family HMM PF00857. | 0.552 |
| ABK72094.1 | lfrR | MSMEG_4548 | MSMEG_6223 | Identified by match to protein family HMM PF00583. | TetR family protein transcriptional repressor LfrR; Represses the transcription of the lfrRA operon by binding directly to the promoter region of lfrR-lfrA. Binds specifically to a 143-bp region upstream of the lfrR gene. | 0.457 |
| ABK72113.1 | ABK70488.1 | MSMEG_0964 | MSMEG_0962 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.557 |
| ABK72113.1 | ABK71703.1 | MSMEG_0964 | MSMEG_0651 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Putative conserved exported protein. | 0.553 |
| ABK72113.1 | ABK71836.1 | MSMEG_0964 | MSMEG_2246 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Conserved hypothetical protein. | 0.534 |
| ABK72113.1 | ABK71851.1 | MSMEG_0964 | MSMEG_0963 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Hypothetical protein; Identified by Glimmer2; putative. | 0.686 |
| ABK72113.1 | ABK72094.1 | MSMEG_0964 | MSMEG_4548 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Identified by match to protein family HMM PF00583. | 0.544 |
| ABK72113.1 | ABK72428.1 | MSMEG_0964 | MSMEG_5332 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.520 |
| ABK72113.1 | ABK74737.1 | MSMEG_0964 | MSMEG_1755 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Anti-sigm factor, ChrR. | 0.513 |
| ABK72113.1 | ABK74867.1 | MSMEG_0964 | MSMEG_3330 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | 0.627 |
| ABK72113.1 | ABK76042.1 | MSMEG_0964 | MSMEG_4396 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Isochorismatase hydrolase; Identified by match to protein family HMM PF00857. | 0.529 |
| ABK72113.1 | lfrR | MSMEG_0964 | MSMEG_6223 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | TetR family protein transcriptional repressor LfrR; Represses the transcription of the lfrRA operon by binding directly to the promoter region of lfrR-lfrA. Binds specifically to a 143-bp region upstream of the lfrR gene. | 0.567 |
| ABK72428.1 | ABK72113.1 | MSMEG_5332 | MSMEG_0964 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.520 |
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