STRINGSTRING
ABK73196.1 ABK73196.1 ABK70956.1 ABK70956.1 ABK69642.1 ABK69642.1 hemL hemL ABK73972.1 ABK73972.1 ABK72985.1 ABK72985.1 ABK72796.1 ABK72796.1 ABK69958.1 ABK69958.1 ABK73399.1 ABK73399.1 ccsB ccsB ABK74432.1 ABK74432.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73196.1Conserved hypothetical protein; Identified by match to protein family HMM TIGR00026. (127 aa)    
Predicted Functional Partners:
ABK70956.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026.
 
   
0.736
ABK69642.1
Cytochrome P450; Identified by match to protein family HMM PF00067.
  
    0.514
hemL
Glutamate-1-semialdehyde-2,1-aminomutase; Identified by match to protein family HMM PF00155; match to protein family HMM PF00202; match to protein family HMM TIGR00713.
       0.513
ABK73972.1
Cytochrome C biogenesis protein transmembrane region; Identified by match to protein family HMM PF02683.
  
    0.451
ABK72985.1
Identified by match to protein family HMM PF00300.
  
    0.449
ABK72796.1
Conserved hypothetical protein.
  
    0.446
ABK69958.1
Conserved membrane protein; Identified by match to protein family HMM PF05140.
  
    0.440
ABK73399.1
Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
  
     0.439
ccsB
Cytochrome c-type biogenesis protein CcsB; Identified by match to protein family HMM PF01578; match to protein family HMM TIGR03144.
  
    0.438
ABK74432.1
HNH endonuclease; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
  
     0.412
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (26%) [HD]