STRINGSTRING
ABK70510.1 ABK70510.1 ABK72001.1 ABK72001.1 ABK74456.1 ABK74456.1 ABK76035.1 ABK76035.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70510.1Identified by match to protein family HMM TIGR02122. (349 aa)    
Predicted Functional Partners:
ABK72001.1
Trap transporter, 4tm/12tm fusion protein; Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM TIGR02123.
 
 
 0.997
ABK74456.1
Two-component system regulator; Identified by match to protein family HMM PF00072.
  
    0.512
ABK76035.1
TRAP transporter, DctM-like membrane protein; Identified by match to protein family HMM PF06808.
  
    0.419
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (26%) [HD]