Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69930.1 | ABK72251.1 | MSMEG_0987 | MSMEG_0985 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.406 |
ABK69930.1 | ABK72433.1 | MSMEG_0987 | MSMEG_0986 | Hypothetical protein; Identified by Glimmer2; putative. | RemM protein; Identified by match to protein family HMM PF00440. | 0.549 |
ABK72251.1 | ABK69930.1 | MSMEG_0985 | MSMEG_0987 | Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Hypothetical protein; Identified by Glimmer2; putative. | 0.406 |
ABK72251.1 | ABK72433.1 | MSMEG_0985 | MSMEG_0986 | Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | RemM protein; Identified by match to protein family HMM PF00440. | 0.551 |
ABK72433.1 | ABK69930.1 | MSMEG_0986 | MSMEG_0987 | RemM protein; Identified by match to protein family HMM PF00440. | Hypothetical protein; Identified by Glimmer2; putative. | 0.549 |
ABK72433.1 | ABK72251.1 | MSMEG_0986 | MSMEG_0985 | RemM protein; Identified by match to protein family HMM PF00440. | Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.551 |
ABK72433.1 | ABK73131.1 | MSMEG_0986 | MSMEG_1987 | RemM protein; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.498 |
ABK72433.1 | ABK75139.1 | MSMEG_0986 | MSMEG_4639 | RemM protein; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.451 |
ABK72433.1 | ABK75664.1 | MSMEG_0986 | MSMEG_1990 | RemM protein; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.468 |
ABK73131.1 | ABK72433.1 | MSMEG_1987 | MSMEG_0986 | Conserved hypothetical protein. | RemM protein; Identified by match to protein family HMM PF00440. | 0.498 |
ABK73131.1 | ABK75139.1 | MSMEG_1987 | MSMEG_4639 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.750 |
ABK73131.1 | ABK75664.1 | MSMEG_1987 | MSMEG_1990 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.895 |
ABK75139.1 | ABK72433.1 | MSMEG_4639 | MSMEG_0986 | Conserved hypothetical protein. | RemM protein; Identified by match to protein family HMM PF00440. | 0.451 |
ABK75139.1 | ABK73131.1 | MSMEG_4639 | MSMEG_1987 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.750 |
ABK75139.1 | ABK75664.1 | MSMEG_4639 | MSMEG_1990 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.799 |
ABK75664.1 | ABK72433.1 | MSMEG_1990 | MSMEG_0986 | Conserved hypothetical protein. | RemM protein; Identified by match to protein family HMM PF00440. | 0.468 |
ABK75664.1 | ABK73131.1 | MSMEG_1990 | MSMEG_1987 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.895 |
ABK75664.1 | ABK75139.1 | MSMEG_1990 | MSMEG_4639 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.799 |