STRINGSTRING
ABK76146.1 ABK76146.1 ABK72733.1 ABK72733.1 ABK69635.1 ABK69635.1 ABK74989.1 ABK74989.1 ABK69988.1 ABK69988.1 ABK73305.1 ABK73305.1 ABK73073.1 ABK73073.1 ABK71747.1 ABK71747.1 ABK73274.1 ABK73274.1 ABK70133.1 ABK70133.1 ABK72402.1 ABK72402.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76146.1Aminoglycoside phosphotransferase; Identified by match to protein family HMM PF01636. (353 aa)    
Predicted Functional Partners:
ABK72733.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
 
 0.937
ABK69635.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
 
 0.884
ABK74989.1
Methyltransferase type 11; Identified by match to protein family HMM PF01170.
       0.712
ABK69988.1
Oxidoreductase, zinc-binding dehydrogenase family protein; Identified by match to protein family HMM PF00107.
 
   0.587
ABK73305.1
Oxidoreductase, zinc-binding dehydrogenase family protein; Identified by match to protein family HMM PF00107.
 
 
 0.578
ABK73073.1
Alcohol dehydrogenase, zinc-binding; Identified by match to protein family HMM PF00107.
 
   0.578
ABK71747.1
ZbpA protein; Identified by match to protein family HMM PF01575.
 
 
 0.518
ABK73274.1
Conserved hypothetical protein.
  
  
 0.459
ABK70133.1
Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
 
 
 0.429
ABK72402.1
Peroxisomal hydratase-dehydrogenase-epimerase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.415
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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