Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70103.1 | ABK70327.1 | MSMEG_4757 | MSMEG_6394 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Conserved hypothetical protein. | 0.698 |
| ABK70103.1 | ABK71193.1 | MSMEG_4757 | MSMEG_4479 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Conserved hypothetical protein. | 0.474 |
| ABK70103.1 | ABK71514.1 | MSMEG_4757 | MSMEG_6180 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Secreted protein. | 0.609 |
| ABK70103.1 | ABK71593.1 | MSMEG_4757 | MSMEG_5007 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | LprB protein. | 0.449 |
| ABK70103.1 | ABK75336.1 | MSMEG_4757 | MSMEG_1008 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Conserved hypothetical protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.668 |
| ABK70103.1 | ABK76052.1 | MSMEG_4757 | MSMEG_6815 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Identified by match to protein family HMM TIGR01409. | 0.520 |
| ABK70103.1 | aftC | MSMEG_4757 | MSMEG_2785 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG. | 0.689 |
| ABK70238.1 | ABK70327.1 | MSMEG_1395 | MSMEG_6394 | Lipoprotein, putative. | Conserved hypothetical protein. | 0.647 |
| ABK70238.1 | ABK71193.1 | MSMEG_1395 | MSMEG_4479 | Lipoprotein, putative. | Conserved hypothetical protein. | 0.466 |
| ABK70238.1 | ABK71514.1 | MSMEG_1395 | MSMEG_6180 | Lipoprotein, putative. | Secreted protein. | 0.660 |
| ABK70238.1 | ABK71593.1 | MSMEG_1395 | MSMEG_5007 | Lipoprotein, putative. | LprB protein. | 0.943 |
| ABK70238.1 | ABK72949.1 | MSMEG_1395 | MSMEG_5057 | Lipoprotein, putative. | Conserved hypothetical protein. | 0.465 |
| ABK70238.1 | ABK75336.1 | MSMEG_1395 | MSMEG_1008 | Lipoprotein, putative. | Conserved hypothetical protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.657 |
| ABK70238.1 | aftC | MSMEG_1395 | MSMEG_2785 | Lipoprotein, putative. | Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG. | 0.588 |
| ABK70327.1 | ABK70103.1 | MSMEG_6394 | MSMEG_4757 | Conserved hypothetical protein. | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 0.698 |
| ABK70327.1 | ABK70238.1 | MSMEG_6394 | MSMEG_1395 | Conserved hypothetical protein. | Lipoprotein, putative. | 0.647 |
| ABK70327.1 | ABK71193.1 | MSMEG_6394 | MSMEG_4479 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.742 |
| ABK70327.1 | ABK71514.1 | MSMEG_6394 | MSMEG_6180 | Conserved hypothetical protein. | Secreted protein. | 0.802 |
| ABK70327.1 | ABK71593.1 | MSMEG_6394 | MSMEG_5007 | Conserved hypothetical protein. | LprB protein. | 0.763 |
| ABK70327.1 | ABK72949.1 | MSMEG_6394 | MSMEG_5057 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.536 |
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