Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69667.1 | ABK69815.1 | MSMEG_1013 | MSMEG_1016 | Conserved hypothetical protein. | Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | 0.614 |
| ABK69667.1 | ABK75904.1 | MSMEG_1013 | MSMEG_1015 | Conserved hypothetical protein. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.815 |
| ABK69667.1 | dinB | MSMEG_1013 | MSMEG_1014 | Conserved hypothetical protein. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.791 |
| ABK69815.1 | ABK69667.1 | MSMEG_1016 | MSMEG_1013 | Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | Conserved hypothetical protein. | 0.614 |
| ABK69815.1 | ABK75904.1 | MSMEG_1016 | MSMEG_1015 | Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.755 |
| ABK69815.1 | dinB | MSMEG_1016 | MSMEG_1014 | Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.587 |
| ABK70399.1 | ABK71249.1 | MSMEG_3319 | MSMEG_1492 | Identified by match to protein family HMM PF00440. | Transcriptional regulator, MarR family protein; Identified by match to protein family HMM PF01047. | 0.680 |
| ABK70399.1 | ABK75904.1 | MSMEG_3319 | MSMEG_1015 | Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.724 |
| ABK70735.1 | ABK75106.1 | MSMEG_0878 | MSMEG_0742 | Transcriptional regulator; Identified by match to protein family HMM PF00440. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.722 |
| ABK70735.1 | ABK75904.1 | MSMEG_0878 | MSMEG_1015 | Transcriptional regulator; Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.691 |
| ABK71249.1 | ABK70399.1 | MSMEG_1492 | MSMEG_3319 | Transcriptional regulator, MarR family protein; Identified by match to protein family HMM PF01047. | Identified by match to protein family HMM PF00440. | 0.680 |
| ABK71249.1 | ABK75106.1 | MSMEG_1492 | MSMEG_0742 | Transcriptional regulator, MarR family protein; Identified by match to protein family HMM PF01047. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.611 |
| ABK71249.1 | ABK75904.1 | MSMEG_1492 | MSMEG_1015 | Transcriptional regulator, MarR family protein; Identified by match to protein family HMM PF01047. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.731 |
| ABK72435.1 | ABK74968.1 | MSMEG_5125 | MSMEG_0089 | Identified by match to protein family HMM PF04264; Belongs to the UPF0312 family. | Chromosome condensation protein; Identified by match to protein family HMM PF02678; match to protein family HMM PF05726; Belongs to the pirin family. | 0.849 |
| ABK72435.1 | ABK75904.1 | MSMEG_5125 | MSMEG_1015 | Identified by match to protein family HMM PF04264; Belongs to the UPF0312 family. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.820 |
| ABK72435.1 | dinB-2 | MSMEG_5125 | MSMEG_2294 | Identified by match to protein family HMM PF04264; Belongs to the UPF0312 family. | DNA polymerase IV; Identified by match to protein family HMM PF00817. | 0.582 |
| ABK74968.1 | ABK72435.1 | MSMEG_0089 | MSMEG_5125 | Chromosome condensation protein; Identified by match to protein family HMM PF02678; match to protein family HMM PF05726; Belongs to the pirin family. | Identified by match to protein family HMM PF04264; Belongs to the UPF0312 family. | 0.849 |
| ABK74968.1 | ABK75904.1 | MSMEG_0089 | MSMEG_1015 | Chromosome condensation protein; Identified by match to protein family HMM PF02678; match to protein family HMM PF05726; Belongs to the pirin family. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.817 |
| ABK75106.1 | ABK70735.1 | MSMEG_0742 | MSMEG_0878 | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.722 |
| ABK75106.1 | ABK71249.1 | MSMEG_0742 | MSMEG_1492 | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, MarR family protein; Identified by match to protein family HMM PF01047. | 0.611 |
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