Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70217.1 | ABK71415.1 | MSMEG_2299 | MSMEG_2313 | Ribonucleoside-diphosphate reductase, alpha subunit; Identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR02506. | Ribonucleoside-diphosphate reductase, beta subunit; Identified by match to protein family HMM PF00268. | 0.979 |
| ABK70217.1 | ABK71958.1 | MSMEG_2299 | MSMEG_1017 | Ribonucleoside-diphosphate reductase, alpha subunit; Identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR02506. | Glutaredoxin; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194. | 0.970 |
| ABK70217.1 | ABK72117.1 | MSMEG_2299 | MSMEG_1033 | Ribonucleoside-diphosphate reductase, alpha subunit; Identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR02506. | Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.979 |
| ABK70217.1 | ABK74759.1 | MSMEG_2299 | MSMEG_6921 | Ribonucleoside-diphosphate reductase, alpha subunit; Identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR02506. | Conserved hypothetical protein; Identified by match to protein family HMM PF02622; Belongs to the UPF0301 (AlgH) family. | 0.962 |
| ABK70217.1 | nrdR | MSMEG_2299 | MSMEG_2743 | Ribonucleoside-diphosphate reductase, alpha subunit; Identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR02506. | Transcriptional regulator, NrdR family protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.446 |
| ABK71199.1 | ABK71958.1 | MSMEG_6723 | MSMEG_1017 | Conserved hypothetical protein. | Glutaredoxin; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194. | 0.561 |
| ABK71199.1 | ABK72117.1 | MSMEG_6723 | MSMEG_1033 | Conserved hypothetical protein. | Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.560 |
| ABK71199.1 | nrdE1 | MSMEG_6723 | MSMEG_1019 | Conserved hypothetical protein. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family. | 0.587 |
| ABK71415.1 | ABK70217.1 | MSMEG_2313 | MSMEG_2299 | Ribonucleoside-diphosphate reductase, beta subunit; Identified by match to protein family HMM PF00268. | Ribonucleoside-diphosphate reductase, alpha subunit; Identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR02506. | 0.979 |
| ABK71415.1 | ABK71958.1 | MSMEG_2313 | MSMEG_1017 | Ribonucleoside-diphosphate reductase, beta subunit; Identified by match to protein family HMM PF00268. | Glutaredoxin; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194. | 0.875 |
| ABK71415.1 | nrdE1 | MSMEG_2313 | MSMEG_1019 | Ribonucleoside-diphosphate reductase, beta subunit; Identified by match to protein family HMM PF00268. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family. | 0.979 |
| ABK71415.1 | nrdR | MSMEG_2313 | MSMEG_2743 | Ribonucleoside-diphosphate reductase, beta subunit; Identified by match to protein family HMM PF00268. | Transcriptional regulator, NrdR family protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.415 |
| ABK71958.1 | ABK70217.1 | MSMEG_1017 | MSMEG_2299 | Glutaredoxin; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194. | Ribonucleoside-diphosphate reductase, alpha subunit; Identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR02506. | 0.970 |
| ABK71958.1 | ABK71199.1 | MSMEG_1017 | MSMEG_6723 | Glutaredoxin; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194. | Conserved hypothetical protein. | 0.561 |
| ABK71958.1 | ABK71415.1 | MSMEG_1017 | MSMEG_2313 | Glutaredoxin; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194. | Ribonucleoside-diphosphate reductase, beta subunit; Identified by match to protein family HMM PF00268. | 0.875 |
| ABK71958.1 | ABK72117.1 | MSMEG_1017 | MSMEG_1033 | Glutaredoxin; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194. | Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.875 |
| ABK71958.1 | ABK74759.1 | MSMEG_1017 | MSMEG_6921 | Glutaredoxin; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194. | Conserved hypothetical protein; Identified by match to protein family HMM PF02622; Belongs to the UPF0301 (AlgH) family. | 0.644 |
| ABK71958.1 | adk | MSMEG_1017 | MSMEG_1484 | Glutaredoxin; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.597 |
| ABK71958.1 | ndk | MSMEG_1017 | MSMEG_4627 | Glutaredoxin; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.562 |
| ABK71958.1 | nrdE1 | MSMEG_1017 | MSMEG_1019 | Glutaredoxin; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family. | 0.970 |
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