STRINGSTRING
ABK71584.1 ABK71584.1 ABK75054.1 ABK75054.1 pabB pabB etfB etfB ABK72321.1 ABK72321.1 ABK73614.1 ABK73614.1 etfA etfA ABK74593.1 ABK74593.1 ABK72276.1 ABK72276.1 ABK74419.1 ABK74419.1 ABK70575.1 ABK70575.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK71584.1Geranylgeranyl reductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM TIGR02032. (395 aa)    
Predicted Functional Partners:
ABK75054.1
Identified by match to protein family HMM PF00753.
      
 0.814
pabB
Para-aminobenzoate synthase, component I; Identified by match to protein family HMM PF00425; match to protein family HMM TIGR00553.
     
 0.571
etfB
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012.
  
 
 0.565
ABK72321.1
Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
       0.550
ABK73614.1
4-amino-4-deoxychorismate lyase.
     
 0.544
etfA
Electron transfer flavoprotein, alpha subunit; Identified by similarity to SP:P38974; match to protein family HMM PF00766; match to protein family HMM PF01012.
  
 
 0.535
ABK74593.1
Conserved hypothetical protein.
 
    0.526
ABK72276.1
Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728.
  
  
 0.495
ABK74419.1
Conserved hypothetical protein.
   
  
 0.477
ABK70575.1
Conserved hypothetical protein.
 
     0.462
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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