Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69526.1 | ABK72321.1 | MSMEG_4196 | MSMEG_1029 | LppL protein. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.489 |
ABK69526.1 | ABK73081.1 | MSMEG_4196 | MSMEG_5518 | LppL protein. | Antigen 34 kDa. | 0.731 |
ABK69526.1 | ABK75765.1 | MSMEG_4196 | MSMEG_2696 | LppL protein. | Putative conserved membrane alanine rich protein. | 0.769 |
ABK71081.1 | ABK72321.1 | MSMEG_1030 | MSMEG_1029 | Monooxygenase. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.526 |
ABK71584.1 | ABK72321.1 | MSMEG_1028 | MSMEG_1029 | Geranylgeranyl reductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM TIGR02032. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.550 |
ABK72321.1 | ABK69526.1 | MSMEG_1029 | MSMEG_4196 | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | LppL protein. | 0.489 |
ABK72321.1 | ABK71081.1 | MSMEG_1029 | MSMEG_1030 | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Monooxygenase. | 0.526 |
ABK72321.1 | ABK71584.1 | MSMEG_1029 | MSMEG_1028 | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Geranylgeranyl reductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM TIGR02032. | 0.550 |
ABK72321.1 | ABK72395.1 | MSMEG_1029 | MSMEG_5040 | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.820 |
ABK72321.1 | ABK73081.1 | MSMEG_1029 | MSMEG_5518 | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Antigen 34 kDa. | 0.621 |
ABK72321.1 | ABK73237.1 | MSMEG_1029 | MSMEG_0371 | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | MaoC like domain protein; Identified by match to protein family HMM PF01575. | 0.645 |
ABK72321.1 | ABK73399.1 | MSMEG_1029 | MSMEG_5074 | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.525 |
ABK72321.1 | ABK75635.1 | MSMEG_1029 | MSMEG_5551 | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Stas domain protein; Identified by match to protein family HMM PF01740. | 0.468 |
ABK72321.1 | ABK75765.1 | MSMEG_1029 | MSMEG_2696 | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Putative conserved membrane alanine rich protein. | 0.540 |
ABK72321.1 | FabG | MSMEG_1029 | MSMEG_0372 | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | 0.512 |
ABK72395.1 | ABK72321.1 | MSMEG_5040 | MSMEG_1029 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.820 |
ABK73081.1 | ABK69526.1 | MSMEG_5518 | MSMEG_4196 | Antigen 34 kDa. | LppL protein. | 0.731 |
ABK73081.1 | ABK72321.1 | MSMEG_5518 | MSMEG_1029 | Antigen 34 kDa. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.621 |
ABK73081.1 | ABK75635.1 | MSMEG_5518 | MSMEG_5551 | Antigen 34 kDa. | Stas domain protein; Identified by match to protein family HMM PF01740. | 0.450 |
ABK73081.1 | ABK75765.1 | MSMEG_5518 | MSMEG_2696 | Antigen 34 kDa. | Putative conserved membrane alanine rich protein. | 0.774 |
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