Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71168.1 | ABK71419.1 | MSMEG_1062 | MSMEG_1063 | O-succinylbenzoic acid--CoA ligase; Identified by match to protein family HMM PF00501. | Conserved hypothetical protein. | 0.783 |
ABK71168.1 | ABK73671.1 | MSMEG_1062 | MSMEG_1061 | O-succinylbenzoic acid--CoA ligase; Identified by match to protein family HMM PF00501. | Phosphohydrolase; Identified by match to protein family HMM PF01243. | 0.693 |
ABK71419.1 | ABK71168.1 | MSMEG_1063 | MSMEG_1062 | Conserved hypothetical protein. | O-succinylbenzoic acid--CoA ligase; Identified by match to protein family HMM PF00501. | 0.783 |
ABK71419.1 | ABK73671.1 | MSMEG_1063 | MSMEG_1061 | Conserved hypothetical protein. | Phosphohydrolase; Identified by match to protein family HMM PF01243. | 0.499 |
ABK71802.1 | ABK73671.1 | MSMEG_1060 | MSMEG_1061 | Putative Lsr2 protein. | Phosphohydrolase; Identified by match to protein family HMM PF01243. | 0.444 |
ABK73671.1 | ABK71168.1 | MSMEG_1061 | MSMEG_1062 | Phosphohydrolase; Identified by match to protein family HMM PF01243. | O-succinylbenzoic acid--CoA ligase; Identified by match to protein family HMM PF00501. | 0.693 |
ABK73671.1 | ABK71419.1 | MSMEG_1061 | MSMEG_1063 | Phosphohydrolase; Identified by match to protein family HMM PF01243. | Conserved hypothetical protein. | 0.499 |
ABK73671.1 | ABK71802.1 | MSMEG_1061 | MSMEG_1060 | Phosphohydrolase; Identified by match to protein family HMM PF01243. | Putative Lsr2 protein. | 0.444 |