Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69717.1 | ABK71986.1 | MSMEG_1099 | MSMEG_1101 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.540 |
| ABK69717.1 | ABK72365.1 | MSMEG_1099 | MSMEG_1100 | Hypothetical protein; Identified by Glimmer2; putative. | Dgpf protein; Identified by match to protein family HMM PF04946. | 0.776 |
| ABK69717.1 | ABK75529.1 | MSMEG_1099 | MSMEG_1102 | Hypothetical protein; Identified by Glimmer2; putative. | Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF07969. | 0.532 |
| ABK69717.1 | menC | MSMEG_1099 | MSMEG_1103 | Hypothetical protein; Identified by Glimmer2; putative. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.487 |
| ABK71986.1 | ABK69717.1 | MSMEG_1101 | MSMEG_1099 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.540 |
| ABK71986.1 | ABK72365.1 | MSMEG_1101 | MSMEG_1100 | Hypothetical protein; Identified by Glimmer2; putative. | Dgpf protein; Identified by match to protein family HMM PF04946. | 0.556 |
| ABK71986.1 | ABK75529.1 | MSMEG_1101 | MSMEG_1102 | Hypothetical protein; Identified by Glimmer2; putative. | Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF07969. | 0.778 |
| ABK71986.1 | menC | MSMEG_1101 | MSMEG_1103 | Hypothetical protein; Identified by Glimmer2; putative. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.710 |
| ABK72175.1 | ABK75529.1 | MSMEG_6887 | MSMEG_1102 | Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. | Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF07969. | 0.424 |
| ABK72365.1 | ABK69717.1 | MSMEG_1100 | MSMEG_1099 | Dgpf protein; Identified by match to protein family HMM PF04946. | Hypothetical protein; Identified by Glimmer2; putative. | 0.776 |
| ABK72365.1 | ABK71986.1 | MSMEG_1100 | MSMEG_1101 | Dgpf protein; Identified by match to protein family HMM PF04946. | Hypothetical protein; Identified by Glimmer2; putative. | 0.556 |
| ABK72365.1 | ABK75529.1 | MSMEG_1100 | MSMEG_1102 | Dgpf protein; Identified by match to protein family HMM PF04946. | Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF07969. | 0.569 |
| ABK72365.1 | menC | MSMEG_1100 | MSMEG_1103 | Dgpf protein; Identified by match to protein family HMM PF04946. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.725 |
| ABK73409.1 | ABK75529.1 | MSMEG_3862 | MSMEG_1102 | FxsA cytoplasmic membrane protein; Identified by match to protein family HMM PF04186. | Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF07969. | 0.582 |
| ABK75529.1 | ABK69717.1 | MSMEG_1102 | MSMEG_1099 | Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF07969. | Hypothetical protein; Identified by Glimmer2; putative. | 0.532 |
| ABK75529.1 | ABK71986.1 | MSMEG_1102 | MSMEG_1101 | Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF07969. | Hypothetical protein; Identified by Glimmer2; putative. | 0.778 |
| ABK75529.1 | ABK72175.1 | MSMEG_1102 | MSMEG_6887 | Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF07969. | Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. | 0.424 |
| ABK75529.1 | ABK72365.1 | MSMEG_1102 | MSMEG_1100 | Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF07969. | Dgpf protein; Identified by match to protein family HMM PF04946. | 0.569 |
| ABK75529.1 | ABK73409.1 | MSMEG_1102 | MSMEG_3862 | Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF07969. | FxsA cytoplasmic membrane protein; Identified by match to protein family HMM PF04186. | 0.582 |
| ABK75529.1 | ABK76071.1 | MSMEG_1102 | MSMEG_0297 | Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF07969. | Amidohydrolase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. | 0.417 |
page 1 of 2