Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69648.1 | ABK72979.1 | MSMEG_0676 | MSMEG_3121 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Identified by match to protein family HMM PF01022. | 0.698 |
| ABK69648.1 | ABK74448.1 | MSMEG_0676 | MSMEG_0548 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. | 0.736 |
| ABK69648.1 | ABK74759.1 | MSMEG_0676 | MSMEG_6921 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein; Identified by match to protein family HMM PF02622; Belongs to the UPF0301 (AlgH) family. | 0.679 |
| ABK69648.1 | ABK75219.1 | MSMEG_0676 | MSMEG_1125 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Regulatory protein, ArsR; Identified by match to protein family HMM PF01726. | 0.644 |
| ABK69648.1 | ABK75689.1 | MSMEG_0676 | MSMEG_2043 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.795 |
| ABK69648.1 | ethR | MSMEG_0676 | MSMEG_6441 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Involved in the repression of teh monooxygenase EthA which is responsible of the formation of the active metabolite of ethionamide (ETH). | 0.596 |
| ABK71528.1 | ABK72965.1 | MSMEG_2686 | MSMEG_1124 | Conserved hypothetical protein. | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.562 |
| ABK71528.1 | ABK75219.1 | MSMEG_2686 | MSMEG_1125 | Conserved hypothetical protein. | Regulatory protein, ArsR; Identified by match to protein family HMM PF01726. | 0.642 |
| ABK72965.1 | ABK71528.1 | MSMEG_1124 | MSMEG_2686 | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Conserved hypothetical protein. | 0.562 |
| ABK72965.1 | ABK73325.1 | MSMEG_1124 | MSMEG_1127 | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Probable conserved transmembrane protein. | 0.798 |
| ABK72965.1 | ABK74791.1 | MSMEG_1124 | MSMEG_1126 | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Hypothetical protein; Identified by Glimmer2; putative. | 0.681 |
| ABK72965.1 | ABK75219.1 | MSMEG_1124 | MSMEG_1125 | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Regulatory protein, ArsR; Identified by match to protein family HMM PF01726. | 0.896 |
| ABK72979.1 | ABK69648.1 | MSMEG_3121 | MSMEG_0676 | Identified by match to protein family HMM PF01022. | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.698 |
| ABK72979.1 | ABK74448.1 | MSMEG_3121 | MSMEG_0548 | Identified by match to protein family HMM PF01022. | Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. | 0.686 |
| ABK72979.1 | ABK74759.1 | MSMEG_3121 | MSMEG_6921 | Identified by match to protein family HMM PF01022. | Conserved hypothetical protein; Identified by match to protein family HMM PF02622; Belongs to the UPF0301 (AlgH) family. | 0.608 |
| ABK72979.1 | ABK75219.1 | MSMEG_3121 | MSMEG_1125 | Identified by match to protein family HMM PF01022. | Regulatory protein, ArsR; Identified by match to protein family HMM PF01726. | 0.634 |
| ABK72979.1 | ABK75689.1 | MSMEG_3121 | MSMEG_2043 | Identified by match to protein family HMM PF01022. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.750 |
| ABK73325.1 | ABK72965.1 | MSMEG_1127 | MSMEG_1124 | Probable conserved transmembrane protein. | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.798 |
| ABK73325.1 | ABK74791.1 | MSMEG_1127 | MSMEG_1126 | Probable conserved transmembrane protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.735 |
| ABK73325.1 | ABK75219.1 | MSMEG_1127 | MSMEG_1125 | Probable conserved transmembrane protein. | Regulatory protein, ArsR; Identified by match to protein family HMM PF01726. | 0.646 |
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