STRINGSTRING
ABK75873.1 ABK75873.1 ABK69816.1 ABK69816.1 ABK70605.1 ABK70605.1 ABK73723.1 ABK73723.1 ABK73951.1 ABK73951.1 ABK69999.1 ABK69999.1 ABK74757.1 ABK74757.1 ABK72935.1 ABK72935.1 ABK72276.1 ABK72276.1 ABK74386.1 ABK74386.1 ABK73669.1 ABK73669.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK75873.1Tryptophan-rich sensory protein; Identified by match to protein family HMM PF03073. (161 aa)    
Predicted Functional Partners:
ABK69816.1
Nucleoside-diphosphate-sugar epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368.
 
  
 0.904
ABK70605.1
Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
  
 0.833
ABK73723.1
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910.
   
  
 0.832
ABK73951.1
Oxidoreductase; Identified by match to protein family HMM PF01370; match to protein family HMM PF05368.
 
  
 0.699
ABK69999.1
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.694
ABK74757.1
Deoxyribodipyrimidine photo-lyase; Identified by match to protein family HMM PF00875; match to protein family HMM PF03441; Belongs to the DNA photolyase family.
 
  
 0.689
ABK72935.1
Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
  
  
 0.633
ABK72276.1
Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728.
  
  
 0.503
ABK74386.1
Amidinotransferase; Identified by match to protein family HMM PF02274.
   
  
 0.454
ABK73669.1
Alkylhydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. Together with AhpD, DlaT and Lpd, constitutes an NADH-dependent peroxidase active against hydrogen and alkyl peroxides as well as serving as a peroxynitrite reductase, thus protecting the bacterium against reactive nitrogen intermediates and oxidative stress generated by the host immune system. Does not however seem to play a role in det [...]
   
  
 0.413
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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