STRINGSTRING
ABK72545.1 ABK72545.1 ABK75999.1 ABK75999.1 ABK70715.1 ABK70715.1 ABK73181.1 ABK73181.1 ABK71207.1 ABK71207.1 ABK70158.1 ABK70158.1 ABK74601.1 ABK74601.1 ABK71275.1 ABK71275.1 asnB asnB asnB-2 asnB-2 etfB etfB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72545.1FAD dependent oxidoreductase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266. (466 aa)    
Predicted Functional Partners:
ABK75999.1
Dihydrodipicolinate synthetase; Identified by match to protein family HMM PF00701; Belongs to the DapA family.
 
    0.936
ABK70715.1
Citrate-proton symporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
  
 0.887
ABK73181.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
 
 
 0.868
ABK71207.1
carnitinyl-CoA dehydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.863
ABK70158.1
Formyl-coenzyme A transferase; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
 
    0.839
ABK74601.1
Identified by match to protein family HMM PF01381; match to protein family HMM PF07883.
 
    0.766
ABK71275.1
5-oxovalerate dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
 
  
 0.729
asnB
Asparagine synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; match to protein family HMM TIGR03104.
  
  
 0.641
asnB-2
Asparagine synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536.
  
  
 0.636
etfB
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012.
  
 
 0.548
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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