Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71275.1 | ABK72768.1 | MSMEG_1158 | MSMEG_1159 | 5-oxovalerate dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | ABC transporter component A. | 0.525 |
| ABK71275.1 | ABK73143.1 | MSMEG_1158 | MSMEG_1163 | 5-oxovalerate dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.406 |
| ABK71275.1 | ABK73458.1 | MSMEG_1158 | MSMEG_1162 | 5-oxovalerate dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Nitrilotriacetate monooxygenase component A. | 0.410 |
| ABK71275.1 | ABK74563.1 | MSMEG_1158 | MSMEG_1160 | 5-oxovalerate dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; Identified by match to protein family HMM PF00005. | 0.510 |
| ABK71275.1 | ABK75548.1 | MSMEG_1158 | MSMEG_1161 | 5-oxovalerate dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Taurine transport system permease protein TauC; Identified by match to protein family HMM PF00528. | 0.439 |
| ABK72349.1 | ABK72495.1 | MSMEG_4586 | MSMEG_3852 | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | 0.930 |
| ABK72349.1 | ABK73458.1 | MSMEG_4586 | MSMEG_1162 | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | Nitrilotriacetate monooxygenase component A. | 0.409 |
| ABK72349.1 | ABK73605.1 | MSMEG_4586 | MSMEG_2800 | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | NADPH-dependent fmn reductase; Identified by match to protein family HMM PF03358. | 0.827 |
| ABK72349.1 | ABK74563.1 | MSMEG_4586 | MSMEG_1160 | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; Identified by match to protein family HMM PF00005. | 0.504 |
| ABK72349.1 | ABK75548.1 | MSMEG_4586 | MSMEG_1161 | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | Taurine transport system permease protein TauC; Identified by match to protein family HMM PF00528. | 0.444 |
| ABK72495.1 | ABK72349.1 | MSMEG_3852 | MSMEG_4586 | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | 0.930 |
| ABK72495.1 | ABK73458.1 | MSMEG_3852 | MSMEG_1162 | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | Nitrilotriacetate monooxygenase component A. | 0.406 |
| ABK72495.1 | ABK73605.1 | MSMEG_3852 | MSMEG_2800 | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | NADPH-dependent fmn reductase; Identified by match to protein family HMM PF03358. | 0.834 |
| ABK72495.1 | ABK74563.1 | MSMEG_3852 | MSMEG_1160 | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; Identified by match to protein family HMM PF00005. | 0.571 |
| ABK72495.1 | ABK75548.1 | MSMEG_3852 | MSMEG_1161 | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | Taurine transport system permease protein TauC; Identified by match to protein family HMM PF00528. | 0.651 |
| ABK72768.1 | ABK71275.1 | MSMEG_1159 | MSMEG_1158 | ABC transporter component A. | 5-oxovalerate dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.525 |
| ABK72768.1 | ABK73143.1 | MSMEG_1159 | MSMEG_1163 | ABC transporter component A. | Hypothetical protein; Identified by Glimmer2; putative. | 0.614 |
| ABK72768.1 | ABK73458.1 | MSMEG_1159 | MSMEG_1162 | ABC transporter component A. | Nitrilotriacetate monooxygenase component A. | 0.811 |
| ABK72768.1 | ABK73605.1 | MSMEG_1159 | MSMEG_2800 | ABC transporter component A. | NADPH-dependent fmn reductase; Identified by match to protein family HMM PF03358. | 0.549 |
| ABK72768.1 | ABK74563.1 | MSMEG_1159 | MSMEG_1160 | ABC transporter component A. | ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; Identified by match to protein family HMM PF00005. | 0.961 |
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