Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70798.1 | ABK71439.1 | MSMEG_3449 | MSMEG_1169 | DNA-binding protein. | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | 0.472 |
ABK70910.1 | ABK71439.1 | MSMEG_1167 | MSMEG_1169 | Cytochrome P450; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | 0.461 |
ABK70910.1 | ABK75250.1 | MSMEG_1167 | MSMEG_1168 | Cytochrome P450; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | Putative transcriptional regulator. | 0.681 |
ABK71439.1 | ABK70798.1 | MSMEG_1169 | MSMEG_3449 | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | DNA-binding protein. | 0.472 |
ABK71439.1 | ABK70910.1 | MSMEG_1169 | MSMEG_1167 | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | Cytochrome P450; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 0.461 |
ABK71439.1 | ABK72833.1 | MSMEG_1169 | MSMEG_1170 | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | Conserved domain protein. | 0.592 |
ABK71439.1 | ABK75250.1 | MSMEG_1169 | MSMEG_1168 | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | Putative transcriptional regulator. | 0.516 |
ABK72833.1 | ABK71439.1 | MSMEG_1170 | MSMEG_1169 | Conserved domain protein. | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | 0.592 |
ABK72833.1 | ABK75250.1 | MSMEG_1170 | MSMEG_1168 | Conserved domain protein. | Putative transcriptional regulator. | 0.412 |
ABK75250.1 | ABK70910.1 | MSMEG_1168 | MSMEG_1167 | Putative transcriptional regulator. | Cytochrome P450; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 0.681 |
ABK75250.1 | ABK71439.1 | MSMEG_1168 | MSMEG_1169 | Putative transcriptional regulator. | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | 0.516 |
ABK75250.1 | ABK72833.1 | MSMEG_1168 | MSMEG_1170 | Putative transcriptional regulator. | Conserved domain protein. | 0.412 |