Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70953.1 | ABK72216.1 | MSMEG_1171 | MSMEG_1175 | Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF01022. | 0.740 |
| ABK70953.1 | ABK73980.1 | MSMEG_1171 | MSMEG_1174 | Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | 0.829 |
| ABK70953.1 | ABK74929.1 | MSMEG_1171 | MSMEG_1173 | Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022. | 0.956 |
| ABK70953.1 | arsB | MSMEG_1171 | MSMEG_1172 | Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832. | 0.997 |
| ABK72216.1 | ABK70953.1 | MSMEG_1175 | MSMEG_1171 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF01022. | Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.740 |
| ABK72216.1 | ABK73980.1 | MSMEG_1175 | MSMEG_1174 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF01022. | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | 0.874 |
| ABK72216.1 | ABK74929.1 | MSMEG_1175 | MSMEG_1173 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF01022. | Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022. | 0.704 |
| ABK72216.1 | arsB | MSMEG_1175 | MSMEG_1172 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF01022. | Identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832. | 0.762 |
| ABK73980.1 | ABK70953.1 | MSMEG_1174 | MSMEG_1171 | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.829 |
| ABK73980.1 | ABK72216.1 | MSMEG_1174 | MSMEG_1175 | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF01022. | 0.874 |
| ABK73980.1 | ABK74767.1 | MSMEG_1174 | MSMEG_5155 | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | Nitroreductase; Identified by match to protein family HMM PF00881. | 0.491 |
| ABK73980.1 | ABK74929.1 | MSMEG_1174 | MSMEG_1173 | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022. | 0.824 |
| ABK73980.1 | ABK75601.1 | MSMEG_1174 | MSMEG_2354 | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | Oxidoreductase; Identified by match to protein family HMM PF00881. | 0.486 |
| ABK73980.1 | arsB | MSMEG_1174 | MSMEG_1172 | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | Identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832. | 0.882 |
| ABK73980.1 | nfnB | MSMEG_1174 | MSMEG_6505 | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | NfnB protein; Confers resistance to antitubercular drugs benzothiazinone (BTZ) and dinitrobenzamide (DNB). Inactivates BTZ and DNB by reducing an essential nitro group of these compounds to amino group or to hydroxyl amine, respectively, using NADH or NADPH as source of reducing equivalents; two electrons are transferred. Able to reduce the nitro group of bicyclic nitroimidazole PA-824, but not of quinone menadione, nitrofurazone, methyl-4-nitrobenzoate, 4-nitrobenzene methyl sulfonate or 4- nitroacetophenone. | 0.492 |
| ABK73980.1 | nuoD | MSMEG_1174 | MSMEG_2060 | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | NADH-quinone oxidoreducatase, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.488 |
| ABK73980.1 | nuoI | MSMEG_1174 | MSMEG_2055 | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | NADH-quinone oxidoreductase, I subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.498 |
| ABK73980.1 | sdhC | MSMEG_1174 | MSMEG_1672 | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | Succinate dehydrogenase, cytochrome b556 subunit; Identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970. | 0.483 |
| ABK74767.1 | ABK73980.1 | MSMEG_5155 | MSMEG_1174 | Nitroreductase; Identified by match to protein family HMM PF00881. | Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903. | 0.491 |
| ABK74929.1 | ABK70953.1 | MSMEG_1173 | MSMEG_1171 | Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022. | Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.956 |
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