STRINGSTRING
ABK72900.1 ABK72900.1 ABK73915.1 ABK73915.1 ABK73220.1 ABK73220.1 ABK70447.1 ABK70447.1 ABK71080.1 ABK71080.1 ABK72089.1 ABK72089.1 ABK71899.1 ABK71899.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72900.1N-acyl-D-aspartate deacylase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07908; match to protein family HMM PF07969. (531 aa)    
Predicted Functional Partners:
ABK73915.1
Putative permease; Identified by match to protein family HMM PF03553; match to protein family HMM PF03600.
 
    0.831
ABK73220.1
D-amino acid deaminase.
 
  
 0.675
ABK70447.1
D-amino acid deaminase.
 
   
 0.639
ABK71080.1
Transcriptional regulator, AsnC family protein; Identified by match to protein family HMM PF01037.
 
    0.531
ABK72089.1
Identified by match to protein family HMM PF07969.
    0.484
ABK71899.1
Amidohydrolase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969.
    0.428
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (20%) [HD]