Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69944.1 | ABK70529.1 | MSMEG_5642 | MSMEG_6767 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | 0.848 |
| ABK69944.1 | ABK71291.1 | MSMEG_5642 | MSMEG_1807 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786. | 0.986 |
| ABK69944.1 | ABK71596.1 | MSMEG_5642 | MSMEG_3953 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | Conserved hypothetical protein. | 0.915 |
| ABK69944.1 | ABK74048.1 | MSMEG_5642 | MSMEG_1204 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Identified by match to protein family HMM PF00109; match to protein family HMM PF02801; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.949 |
| ABK69944.1 | accD | MSMEG_5642 | MSMEG_2169 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Identified by match to protein family HMM PF01039. | 0.997 |
| ABK69944.1 | fabD | MSMEG_5642 | MSMEG_4325 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | Malonyl CoA-acyl carrier protein transacylase; Belongs to the FabD family. | 0.875 |
| ABK69944.1 | fabG-3 | MSMEG_5642 | MSMEG_3150 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | 3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.422 |
| ABK69944.1 | inhA | MSMEG_5642 | MSMEG_3151 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | [NADH] enoyl-[acyl-carrier-protein] reductase; Enoyl-ACP reductase of the type II fatty acid syntase (FAS- II) system, which is involved in the biosynthesis of mycolic acids, a major component of mycobacterial cell walls. Catalyzes the NADH-dependent reduction of the double bond of 2-trans- enoyl-[acyl-carrier protein], an essential step in the fatty acid elongation cycle of the FAS-II pathway. Shows preference for long-chain fatty acyl thioester substrates (>C16), and can also use 2-trans-enoyl-CoAs as alternative substrates (By similarity). The mycobacterial FAS-II system utilizes th [...] | 0.945 |
| ABK69944.1 | mdcH | MSMEG_5642 | MSMEG_6629 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | Malonate decarboxylase, epsilon subunit; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR03131. | 0.884 |
| ABK69944.1 | pks | MSMEG_5642 | MSMEG_0408 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.874 |
| ABK70529.1 | ABK69944.1 | MSMEG_6767 | MSMEG_5642 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | 0.848 |
| ABK70529.1 | ABK71291.1 | MSMEG_6767 | MSMEG_1807 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786. | 0.516 |
| ABK70529.1 | ABK71596.1 | MSMEG_6767 | MSMEG_3953 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Conserved hypothetical protein. | 0.596 |
| ABK70529.1 | ABK74048.1 | MSMEG_6767 | MSMEG_1204 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Identified by match to protein family HMM PF00109; match to protein family HMM PF02801; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.882 |
| ABK70529.1 | accD | MSMEG_6767 | MSMEG_2169 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Identified by match to protein family HMM PF01039. | 0.847 |
| ABK70529.1 | fabD | MSMEG_6767 | MSMEG_4325 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Malonyl CoA-acyl carrier protein transacylase; Belongs to the FabD family. | 0.990 |
| ABK70529.1 | inhA | MSMEG_6767 | MSMEG_3151 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | [NADH] enoyl-[acyl-carrier-protein] reductase; Enoyl-ACP reductase of the type II fatty acid syntase (FAS- II) system, which is involved in the biosynthesis of mycolic acids, a major component of mycobacterial cell walls. Catalyzes the NADH-dependent reduction of the double bond of 2-trans- enoyl-[acyl-carrier protein], an essential step in the fatty acid elongation cycle of the FAS-II pathway. Shows preference for long-chain fatty acyl thioester substrates (>C16), and can also use 2-trans-enoyl-CoAs as alternative substrates (By similarity). The mycobacterial FAS-II system utilizes th [...] | 0.732 |
| ABK70529.1 | mdcH | MSMEG_6767 | MSMEG_6629 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Malonate decarboxylase, epsilon subunit; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR03131. | 0.991 |
| ABK70529.1 | pks | MSMEG_6767 | MSMEG_0408 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.966 |
| ABK71291.1 | ABK69944.1 | MSMEG_1807 | MSMEG_5642 | Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786. | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | 0.986 |
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