Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70026.1 | ABK71642.1 | MSMEG_1433 | MSMEG_1211 | Thioesterase. | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | 0.563 |
ABK70026.1 | ABK74076.1 | MSMEG_1433 | MSMEG_1742 | Thioesterase. | Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.493 |
ABK70026.1 | ABK74927.1 | MSMEG_1433 | MSMEG_6835 | Thioesterase. | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | 0.544 |
ABK70026.1 | ABK75634.1 | MSMEG_1433 | MSMEG_6836 | Thioesterase. | Putative oxidoreductase; Identified by match to protein family HMM PF00111. | 0.519 |
ABK70026.1 | ABK75848.1 | MSMEG_1433 | MSMEG_1743 | Thioesterase. | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | 0.622 |
ABK70026.1 | ABK76150.1 | MSMEG_1433 | MSMEG_1886 | Thioesterase. | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | 0.555 |
ABK71642.1 | ABK70026.1 | MSMEG_1211 | MSMEG_1433 | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | Thioesterase. | 0.563 |
ABK71642.1 | ABK71679.1 | MSMEG_1211 | MSMEG_5773 | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | 0.927 |
ABK71642.1 | ABK72596.1 | MSMEG_1211 | MSMEG_1210 | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | Conserved hypothetical protein; Identified by match to protein family HMM PF01936. | 0.550 |
ABK71642.1 | ABK74076.1 | MSMEG_1211 | MSMEG_1742 | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.987 |
ABK71642.1 | ABK74765.1 | MSMEG_1211 | MSMEG_1885 | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | 2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.989 |
ABK71642.1 | ABK74927.1 | MSMEG_1211 | MSMEG_6835 | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | 0.907 |
ABK71642.1 | ABK75196.1 | MSMEG_1211 | MSMEG_5248 | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | acyl-[ACP] desaturase; Identified by match to protein family HMM PF03405. | 0.934 |
ABK71642.1 | ABK75634.1 | MSMEG_1211 | MSMEG_6836 | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | Putative oxidoreductase; Identified by match to protein family HMM PF00111. | 0.988 |
ABK71642.1 | ABK75848.1 | MSMEG_1211 | MSMEG_1743 | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | 0.906 |
ABK71642.1 | ABK76150.1 | MSMEG_1211 | MSMEG_1886 | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | 0.904 |
ABK71679.1 | ABK71642.1 | MSMEG_5773 | MSMEG_1211 | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | 0.927 |
ABK71679.1 | ABK74076.1 | MSMEG_5773 | MSMEG_1742 | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.917 |
ABK71679.1 | ABK74765.1 | MSMEG_5773 | MSMEG_1885 | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | 2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.917 |
ABK71679.1 | ABK74927.1 | MSMEG_5773 | MSMEG_6835 | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | 0.912 |
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