STRINGSTRING
ABK71642.1 ABK71642.1 ABK74765.1 ABK74765.1 ABK75634.1 ABK75634.1 ABK74076.1 ABK74076.1 ABK75196.1 ABK75196.1 ABK71679.1 ABK71679.1 ABK74927.1 ABK74927.1 ABK75848.1 ABK75848.1 ABK76150.1 ABK76150.1 ABK70026.1 ABK70026.1 ABK72596.1 ABK72596.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71642.1Fatty acid desaturase; Identified by match to protein family HMM PF00487. (363 aa)    
Predicted Functional Partners:
ABK74765.1
2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
 
 0.989
ABK75634.1
Putative oxidoreductase; Identified by match to protein family HMM PF00111.
 
 0.988
ABK74076.1
Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
 
 0.987
ABK75196.1
acyl-[ACP] desaturase; Identified by match to protein family HMM PF03405.
  
 
 0.934
ABK71679.1
Fatty acid desaturase; Identified by match to protein family HMM PF03405.
  
 
 0.927
ABK74927.1
Fatty acid desaturase; Identified by match to protein family HMM PF00487.
  
 
 
0.907
ABK75848.1
Fatty acid desaturase; Identified by match to protein family HMM PF00487.
  
 
 
0.906
ABK76150.1
Fatty acid desaturase; Identified by match to protein family HMM PF00487.
  
 
 
0.904
ABK70026.1
Thioesterase.
 
  
 0.563
ABK72596.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01936.
  
    0.550
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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