STRINGSTRING
ABK70454.1 ABK70454.1 ABK72024.1 ABK72024.1 rbpA rbpA ABK72811.1 ABK72811.1 aac aac ABK74889.1 ABK74889.1 ABK70004.1 ABK70004.1 ABK69666.1 ABK69666.1 ABK73791.1 ABK73791.1 ABK74804.1 ABK74804.1 rpoB rpoB
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABK70454.1Rifampin ADP-ribosyl transferase. (38 aa)    
Predicted Functional Partners:
ABK72024.1
Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
     
 0.605
rbpA
Conserved hypothetical protein; Binds to RNA polymerase (RNAP), probably stimulating transcriptions from principal, but not alternative sigma factor promoters (By similarity). Partially restores transcription in the presence of rifampicin (Rif) in vitro; overexpression leads to an increase in the Rif tolerance in vivo, with smaller colonies. Seems to act by removing Rif from its binding site and preventing its further binding. No longer stimulates transcription in Rif-resistant RNA polymerase (with mutations in rpoB).
      
 0.603
ABK72811.1
Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724.
     
 0.598
aac
Aminoglycoside 2'-N-acetyltransferase (AAC(2')-Id); Catalyzes the coenzyme A-dependent acetylation of the 2' hydroxyl or amino group of a broad spectrum of aminoglycosides. It confers resistance to aminoglycosides; Belongs to the AAC(2')-I acetyltransferase family.
     
 0.597
ABK74889.1
Permease of the major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
  
    0.597
ABK70004.1
Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690.
  
    0.597
ABK69666.1
Superfamily protein I DNA or RNA helicase.
     
 0.588
ABK73791.1
Oxalate decarboxylase OxdC, putative; Identified by match to protein family HMM PF00190; match to protein family HMM PF07883.
      
 0.586
ABK74804.1
ISMsm6, transposase; Identified by similarity to GP:2935133; match to protein family HMM PF01609.
       0.542
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. This subunit often mutates to generate rifampicin (Rif) resistance. Interaction with RbpA partially restores Rif-inhibited transcription; once the subunit is Rif-resistant however RbpA no longer stimulates transcription.
      
 0.534
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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