STRINGSTRING
ABK71992.1 ABK71992.1 ABK70238.1 ABK70238.1 ABK70441.1 ABK70441.1 ABK75703.1 ABK75703.1 ABK70470.1 ABK70470.1 ABK75632.1 ABK75632.1 ABK75300.1 ABK75300.1 ABK71419.1 ABK71419.1 ABK72399.1 ABK72399.1 ABK72212.1 ABK72212.1 ABK72581.1 ABK72581.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71992.1Mpr protein. (215 aa)    
Predicted Functional Partners:
ABK70238.1
Lipoprotein, putative.
  
    0.633
ABK70441.1
LprB protein.
  
    0.599
ABK75703.1
Conserved hypothetical protein.
  
    0.576
ABK70470.1
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.574
ABK75632.1
Conserved hypothetical protein.
 
    0.516
ABK75300.1
Conserved hypothetical protein.
 
    0.478
ABK71419.1
Conserved hypothetical protein.
  
    0.455
ABK72399.1
Identified by match to protein family HMM PF05425.
  
     0.419
ABK72212.1
UvrD/Rep helicase; Identified by match to protein family HMM PF00580.
 
     0.416
ABK72581.1
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.411
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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