Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70238.1 | ABK70441.1 | MSMEG_1395 | MSMEG_1396 | Lipoprotein, putative. | LprB protein. | 0.949 |
ABK70238.1 | ABK71992.1 | MSMEG_1395 | MSMEG_1236 | Lipoprotein, putative. | Mpr protein. | 0.633 |
ABK70238.1 | ABK72399.1 | MSMEG_1395 | MSMEG_6437 | Lipoprotein, putative. | Identified by match to protein family HMM PF05425. | 0.651 |
ABK70238.1 | ABK72581.1 | MSMEG_1395 | MSMEG_0368 | Lipoprotein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.613 |
ABK70238.1 | ABK75300.1 | MSMEG_1395 | MSMEG_2922 | Lipoprotein, putative. | Conserved hypothetical protein. | 0.451 |
ABK70238.1 | ABK75632.1 | MSMEG_1395 | MSMEG_6914 | Lipoprotein, putative. | Conserved hypothetical protein. | 0.698 |
ABK70441.1 | ABK70238.1 | MSMEG_1396 | MSMEG_1395 | LprB protein. | Lipoprotein, putative. | 0.949 |
ABK70441.1 | ABK71992.1 | MSMEG_1396 | MSMEG_1236 | LprB protein. | Mpr protein. | 0.599 |
ABK70441.1 | ABK72399.1 | MSMEG_1396 | MSMEG_6437 | LprB protein. | Identified by match to protein family HMM PF05425. | 0.669 |
ABK70441.1 | ABK72581.1 | MSMEG_1396 | MSMEG_0368 | LprB protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.578 |
ABK70441.1 | ABK75300.1 | MSMEG_1396 | MSMEG_2922 | LprB protein. | Conserved hypothetical protein. | 0.566 |
ABK70441.1 | ABK75632.1 | MSMEG_1396 | MSMEG_6914 | LprB protein. | Conserved hypothetical protein. | 0.658 |
ABK70470.1 | ABK71992.1 | MSMEG_1237 | MSMEG_1236 | Hypothetical protein; Identified by Glimmer2; putative. | Mpr protein. | 0.574 |
ABK71419.1 | ABK71992.1 | MSMEG_1063 | MSMEG_1236 | Conserved hypothetical protein. | Mpr protein. | 0.455 |
ABK71419.1 | ABK75703.1 | MSMEG_1063 | MSMEG_1066 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.606 |
ABK71992.1 | ABK70238.1 | MSMEG_1236 | MSMEG_1395 | Mpr protein. | Lipoprotein, putative. | 0.633 |
ABK71992.1 | ABK70441.1 | MSMEG_1236 | MSMEG_1396 | Mpr protein. | LprB protein. | 0.599 |
ABK71992.1 | ABK70470.1 | MSMEG_1236 | MSMEG_1237 | Mpr protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.574 |
ABK71992.1 | ABK71419.1 | MSMEG_1236 | MSMEG_1063 | Mpr protein. | Conserved hypothetical protein. | 0.455 |
ABK71992.1 | ABK72212.1 | MSMEG_1236 | MSMEG_1255 | Mpr protein. | UvrD/Rep helicase; Identified by match to protein family HMM PF00580. | 0.416 |
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