STRINGSTRING
ABK70470.1 ABK70470.1 ABK75347.1 ABK75347.1 ABK70792.1 ABK70792.1 ABK72847.1 ABK72847.1 ABK71992.1 ABK71992.1 ABK72168.1 ABK72168.1 ABK73163.1 ABK73163.1 ABK74074.1 ABK74074.1 ABK72970.1 ABK72970.1 recA recA ABK74109.1 ABK74109.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70470.1Hypothetical protein; Identified by Glimmer2; putative. (105 aa)    
Predicted Functional Partners:
ABK75347.1
Conserved hypothetical protein.
 
    0.756
ABK70792.1
Conserved hypothetical protein.
 
    0.744
ABK72847.1
Conserved hypothetical protein.
 
    0.738
ABK71992.1
Mpr protein.
  
  
 0.574
ABK72168.1
Cobalt transport protein CbiM.
  
    0.552
ABK73163.1
Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family.
 
    0.476
ABK74074.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05114.
  
    0.467
ABK72970.1
Conserved hypothetical protein.
 
 
 0.450
recA
Protein RecA; Required for homologous recombination (HR) and the bypass of mutagenic DNA lesions (double strand breaks, DSB) by the SOS response. Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. Numerous X-ray crystals have been resolved under different conditions which indicate the flexibility of the protein, essential to its function. Gln-196 contributes to this plasticity by acting as a switch residue, which transmits the ef [...]
  
  
 0.434
ABK74109.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.
  
  
 0.430
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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