STRINGSTRING
ABK73870.1 ABK73870.1 ABK72923.1 ABK72923.1 ABK71955.1 ABK71955.1 ABK75674.1 ABK75674.1 iscS iscS ABK71018.1 ABK71018.1 ABK70821.1 ABK70821.1 ABK74900.1 ABK74900.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73870.1Conserved hypothetical protein. (357 aa)    
Predicted Functional Partners:
ABK72923.1
Conserved hypothetical protein.
 
    0.957
ABK71955.1
Phosphoadenosine phosphosulfate reductase; Identified by match to protein family HMM PF01507.
 
    0.956
ABK75674.1
Conserved hypothetical protein.
 
    0.848
iscS
Cysteine desulfurase IscS; Identified by match to protein family HMM PF00266.
  
    0.797
ABK71018.1
Conserved hypothetical protein.
 
    0.759
ABK70821.1
Type III restriction enzyme, res subunit; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.
 
    0.576
ABK74900.1
Conserved hypothetical protein.
  
    0.458
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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