Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69628.1 | ABK71058.1 | MSMEG_1247 | MSMEG_3213 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.491 |
ABK69628.1 | ABK73092.1 | MSMEG_1247 | MSMEG_4663 | Conserved hypothetical protein. | Protein IolB; Identified by match to protein family HMM PF06845. | 0.591 |
ABK69628.1 | ABK73328.1 | MSMEG_1247 | MSMEG_5044 | Conserved hypothetical protein. | ATPase. | 0.430 |
ABK69628.1 | ABK75216.1 | MSMEG_1247 | MSMEG_6665 | Conserved hypothetical protein. | Integral membrane protein. | 0.690 |
ABK69628.1 | ABK75409.1 | MSMEG_1247 | MSMEG_6728 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.667 |
ABK69628.1 | ABK75560.1 | MSMEG_1247 | MSMEG_1248 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.464 |
ABK69628.1 | nnrD | MSMEG_1247 | MSMEG_1573 | Conserved hypothetical protein. | Carbohydrate kinase family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repa [...] | 0.445 |
ABK71058.1 | ABK69628.1 | MSMEG_3213 | MSMEG_1247 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.491 |
ABK71058.1 | ABK73328.1 | MSMEG_3213 | MSMEG_5044 | Conserved hypothetical protein. | ATPase. | 0.633 |
ABK71058.1 | ABK75216.1 | MSMEG_3213 | MSMEG_6665 | Conserved hypothetical protein. | Integral membrane protein. | 0.579 |
ABK73092.1 | ABK69628.1 | MSMEG_4663 | MSMEG_1247 | Protein IolB; Identified by match to protein family HMM PF06845. | Conserved hypothetical protein. | 0.591 |
ABK73092.1 | ABK73328.1 | MSMEG_4663 | MSMEG_5044 | Protein IolB; Identified by match to protein family HMM PF06845. | ATPase. | 0.591 |
ABK73092.1 | ABK75216.1 | MSMEG_4663 | MSMEG_6665 | Protein IolB; Identified by match to protein family HMM PF06845. | Integral membrane protein. | 0.690 |
ABK73092.1 | ABK75409.1 | MSMEG_4663 | MSMEG_6728 | Protein IolB; Identified by match to protein family HMM PF06845. | Conserved hypothetical protein. | 0.644 |
ABK73328.1 | ABK69628.1 | MSMEG_5044 | MSMEG_1247 | ATPase. | Conserved hypothetical protein. | 0.430 |
ABK73328.1 | ABK71058.1 | MSMEG_5044 | MSMEG_3213 | ATPase. | Conserved hypothetical protein. | 0.633 |
ABK73328.1 | ABK73092.1 | MSMEG_5044 | MSMEG_4663 | ATPase. | Protein IolB; Identified by match to protein family HMM PF06845. | 0.591 |
ABK73328.1 | ABK75216.1 | MSMEG_5044 | MSMEG_6665 | ATPase. | Integral membrane protein. | 0.691 |
ABK73328.1 | ABK75409.1 | MSMEG_5044 | MSMEG_6728 | ATPase. | Conserved hypothetical protein. | 0.667 |
ABK73328.1 | nnrD | MSMEG_5044 | MSMEG_1573 | ATPase. | Carbohydrate kinase family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repa [...] | 0.437 |
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