Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70238.1 | ABK70441.1 | MSMEG_1395 | MSMEG_1396 | Lipoprotein, putative. | LprB protein. | 0.949 |
ABK70238.1 | ABK73558.1 | MSMEG_1395 | MSMEG_1252 | Lipoprotein, putative. | Conserved hypothetical protein. | 0.415 |
ABK70238.1 | ABK73568.1 | MSMEG_1395 | MSMEG_5547 | Lipoprotein, putative. | Conserved hypothetical protein. | 0.434 |
ABK70238.1 | ABK75418.1 | MSMEG_1395 | MSMEG_4647 | Lipoprotein, putative. | Carbohydrate kinase, PfkB, putative; Identified by match to protein family HMM PF00294. | 0.654 |
ABK70441.1 | ABK70238.1 | MSMEG_1396 | MSMEG_1395 | LprB protein. | Lipoprotein, putative. | 0.949 |
ABK70441.1 | ABK73558.1 | MSMEG_1396 | MSMEG_1252 | LprB protein. | Conserved hypothetical protein. | 0.446 |
ABK70441.1 | ABK73568.1 | MSMEG_1396 | MSMEG_5547 | LprB protein. | Conserved hypothetical protein. | 0.520 |
ABK70441.1 | ABK75418.1 | MSMEG_1396 | MSMEG_4647 | LprB protein. | Carbohydrate kinase, PfkB, putative; Identified by match to protein family HMM PF00294. | 0.711 |
ABK71058.1 | ABK73558.1 | MSMEG_3213 | MSMEG_1252 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.550 |
ABK71058.1 | ABK75216.1 | MSMEG_3213 | MSMEG_6665 | Conserved hypothetical protein. | Integral membrane protein. | 0.579 |
ABK72735.1 | ABK73558.1 | MSMEG_2739 | MSMEG_1252 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.432 |
ABK72735.1 | ABK75418.1 | MSMEG_2739 | MSMEG_4647 | Conserved hypothetical protein. | Carbohydrate kinase, PfkB, putative; Identified by match to protein family HMM PF00294. | 0.492 |
ABK73092.1 | ABK73558.1 | MSMEG_4663 | MSMEG_1252 | Protein IolB; Identified by match to protein family HMM PF06845. | Conserved hypothetical protein. | 0.591 |
ABK73092.1 | ABK75216.1 | MSMEG_4663 | MSMEG_6665 | Protein IolB; Identified by match to protein family HMM PF06845. | Integral membrane protein. | 0.690 |
ABK73092.1 | ABK75409.1 | MSMEG_4663 | MSMEG_6728 | Protein IolB; Identified by match to protein family HMM PF06845. | Conserved hypothetical protein. | 0.644 |
ABK73092.1 | ABK75418.1 | MSMEG_4663 | MSMEG_4647 | Protein IolB; Identified by match to protein family HMM PF06845. | Carbohydrate kinase, PfkB, putative; Identified by match to protein family HMM PF00294. | 0.506 |
ABK73558.1 | ABK70238.1 | MSMEG_1252 | MSMEG_1395 | Conserved hypothetical protein. | Lipoprotein, putative. | 0.415 |
ABK73558.1 | ABK70441.1 | MSMEG_1252 | MSMEG_1396 | Conserved hypothetical protein. | LprB protein. | 0.446 |
ABK73558.1 | ABK71058.1 | MSMEG_1252 | MSMEG_3213 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.550 |
ABK73558.1 | ABK72735.1 | MSMEG_1252 | MSMEG_2739 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.432 |
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