STRINGSTRING
ABK76007.1 ABK76007.1 aroK aroK ABK73097.1 ABK73097.1 ABK76019.1 ABK76019.1 ABK76121.1 ABK76121.1 ABK71709.1 ABK71709.1 ABK69598.1 ABK69598.1 ABK73469.1 ABK73469.1 ABK74532.1 ABK74532.1 ABK74701.1 ABK74701.1 ABK71048.1 ABK71048.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76007.1Gluconolactonase; Identified by match to protein family HMM PF03758. (375 aa)    
Predicted Functional Partners:
aroK
Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313.
  
 
 0.913
ABK73097.1
Probable monooxygenase.
  
 
  0.910
ABK76019.1
Cyclododecanone monooxygenase; Identified by match to protein family HMM PF01266.
  
 
  0.910
ABK76121.1
Gluconolactonase; Identified by match to protein family HMM PF03758.
  
    0.662
ABK71709.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05305.
  
    0.603
ABK69598.1
2-keto-3-deoxy-galactonokinase; Identified by match to protein family HMM PF05035.
 
  
 0.573
ABK73469.1
Calcium-binding protein.
  
    0.548
ABK74532.1
HNH nuclease, putative.
  
    0.467
ABK74701.1
NAD-dependent epimerase/dehydratase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993.
 
  
 0.439
ABK71048.1
Identified by match to protein family HMM PF00857.
 
    0.418
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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