Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69598.1 | ABK73469.1 | MSMEG_6175 | MSMEG_4005 | 2-keto-3-deoxy-galactonokinase; Identified by match to protein family HMM PF05035. | Calcium-binding protein. | 0.533 |
ABK69598.1 | ABK76007.1 | MSMEG_6175 | MSMEG_1274 | 2-keto-3-deoxy-galactonokinase; Identified by match to protein family HMM PF05035. | Gluconolactonase; Identified by match to protein family HMM PF03758. | 0.573 |
ABK71048.1 | ABK76007.1 | MSMEG_4126 | MSMEG_1274 | Identified by match to protein family HMM PF00857. | Gluconolactonase; Identified by match to protein family HMM PF03758. | 0.418 |
ABK71709.1 | ABK76007.1 | MSMEG_1273 | MSMEG_1274 | Conserved hypothetical protein; Identified by match to protein family HMM PF05305. | Gluconolactonase; Identified by match to protein family HMM PF03758. | 0.603 |
ABK73097.1 | ABK76007.1 | MSMEG_2567 | MSMEG_1274 | Probable monooxygenase. | Gluconolactonase; Identified by match to protein family HMM PF03758. | 0.910 |
ABK73097.1 | ABK76019.1 | MSMEG_2567 | MSMEG_5625 | Probable monooxygenase. | Cyclododecanone monooxygenase; Identified by match to protein family HMM PF01266. | 0.933 |
ABK73097.1 | ABK76121.1 | MSMEG_2567 | MSMEG_2561 | Probable monooxygenase. | Gluconolactonase; Identified by match to protein family HMM PF03758. | 0.554 |
ABK73469.1 | ABK69598.1 | MSMEG_4005 | MSMEG_6175 | Calcium-binding protein. | 2-keto-3-deoxy-galactonokinase; Identified by match to protein family HMM PF05035. | 0.533 |
ABK73469.1 | ABK76007.1 | MSMEG_4005 | MSMEG_1274 | Calcium-binding protein. | Gluconolactonase; Identified by match to protein family HMM PF03758. | 0.548 |
ABK74532.1 | ABK76007.1 | MSMEG_1275 | MSMEG_1274 | HNH nuclease, putative. | Gluconolactonase; Identified by match to protein family HMM PF03758. | 0.467 |
ABK74701.1 | ABK76007.1 | MSMEG_6843 | MSMEG_1274 | NAD-dependent epimerase/dehydratase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993. | Gluconolactonase; Identified by match to protein family HMM PF03758. | 0.439 |
ABK76007.1 | ABK69598.1 | MSMEG_1274 | MSMEG_6175 | Gluconolactonase; Identified by match to protein family HMM PF03758. | 2-keto-3-deoxy-galactonokinase; Identified by match to protein family HMM PF05035. | 0.573 |
ABK76007.1 | ABK71048.1 | MSMEG_1274 | MSMEG_4126 | Gluconolactonase; Identified by match to protein family HMM PF03758. | Identified by match to protein family HMM PF00857. | 0.418 |
ABK76007.1 | ABK71709.1 | MSMEG_1274 | MSMEG_1273 | Gluconolactonase; Identified by match to protein family HMM PF03758. | Conserved hypothetical protein; Identified by match to protein family HMM PF05305. | 0.603 |
ABK76007.1 | ABK73097.1 | MSMEG_1274 | MSMEG_2567 | Gluconolactonase; Identified by match to protein family HMM PF03758. | Probable monooxygenase. | 0.910 |
ABK76007.1 | ABK73469.1 | MSMEG_1274 | MSMEG_4005 | Gluconolactonase; Identified by match to protein family HMM PF03758. | Calcium-binding protein. | 0.548 |
ABK76007.1 | ABK74532.1 | MSMEG_1274 | MSMEG_1275 | Gluconolactonase; Identified by match to protein family HMM PF03758. | HNH nuclease, putative. | 0.467 |
ABK76007.1 | ABK74701.1 | MSMEG_1274 | MSMEG_6843 | Gluconolactonase; Identified by match to protein family HMM PF03758. | NAD-dependent epimerase/dehydratase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993. | 0.439 |
ABK76007.1 | ABK76019.1 | MSMEG_1274 | MSMEG_5625 | Gluconolactonase; Identified by match to protein family HMM PF03758. | Cyclododecanone monooxygenase; Identified by match to protein family HMM PF01266. | 0.910 |
ABK76007.1 | ABK76121.1 | MSMEG_1274 | MSMEG_2561 | Gluconolactonase; Identified by match to protein family HMM PF03758. | Gluconolactonase; Identified by match to protein family HMM PF03758. | 0.662 |
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