STRINGSTRING
ABK72930.1 ABK72930.1 ABK74532.1 ABK74532.1 ABK74203.1 ABK74203.1 ABK73635.1 ABK73635.1 phd phd doc doc ABK75702.1 ABK75702.1 ABK71076.1 ABK71076.1 ABK74215.1 ABK74215.1 ABK71232.1 ABK71232.1 ABK70998.1 ABK70998.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK72930.1Hypothetical protein; Identified by Glimmer2; putative. (98 aa)    
Predicted Functional Partners:
ABK74532.1
HNH nuclease, putative.
 
    0.799
ABK74203.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.616
ABK73635.1
Conserved hypothetical protein.
  
    0.480
phd
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. Neutralizes the bacteriostatic effect of cognate toxin Doc. In M.smegmatis 3 TA systems (VapB-VapC, MazE-MazF and Phd-Doc) may be involved in monitoring the nutritional supply and physiological state of the cell, linking catabolic with anabolic reactions.
       0.477
doc
Death-on-curing protein; Toxic component of a type II toxin-antitoxin (TA) system. Upon overexpression causes bacteriostasis. Its effect is neutralized by coexpression with cognate antitoxin PhD. May bind the 30S ribosomal subunit. In M.smegmatis 3 TA systems (VapB-VapC, MazE-MazF and Phd-Doc) may be involved in monitoring the nutritional supply and physiological state of the cell, linking catabolic with anabolic reactions.
       0.477
ABK75702.1
Thiocyanate hydrolase beta subunit.
  
     0.438
ABK71076.1
Conserved hypothetical protein.
  
    0.433
ABK74215.1
Conserved hypothetical protein.
  
    0.419
ABK71232.1
Conserved hypothetical protein.
  
    0.417
ABK70998.1
Iron-sulfur cluster-binding protein, Rieske family protein, putative; Identified by match to protein family HMM PF01106.
  
    0.407
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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