Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70095.1 | ABK72620.1 | MSMEG_2778 | MSMEG_1288 | Identified by match to protein family HMM PF00570; match to protein family HMM PF01612. | Conserved hypothetical protein. | 0.454 |
| ABK70095.1 | ABK75618.1 | MSMEG_2778 | MSMEG_5004 | Identified by match to protein family HMM PF00570; match to protein family HMM PF01612. | DNA repair exonuclease; Identified by match to protein family HMM PF00149. | 0.517 |
| ABK70095.1 | rnc | MSMEG_2778 | MSMEG_2418 | Identified by match to protein family HMM PF00570; match to protein family HMM PF01612. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the all rRNAs (23S, 16S and 5S) (Probable). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | 0.605 |
| ABK70583.1 | ABK72017.1 | MSMEG_3937 | MSMEG_0868 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.716 |
| ABK70583.1 | ABK72620.1 | MSMEG_3937 | MSMEG_1288 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.457 |
| ABK71307.1 | ABK71818.1 | MSMEG_1286 | MSMEG_1287 | Identified by match to protein family HMM PF00884. | Similar to Streptomyces cyclase/dehydrase superfamily protein; identified by match to protein family HMM PF03364. | 0.807 |
| ABK71307.1 | ABK72620.1 | MSMEG_1286 | MSMEG_1288 | Identified by match to protein family HMM PF00884. | Conserved hypothetical protein. | 0.524 |
| ABK71307.1 | ABK75566.1 | MSMEG_1286 | MSMEG_1285 | Identified by match to protein family HMM PF00884. | Identified by match to protein family HMM PF02810; match to protein family HMM PF07721. | 0.913 |
| ABK71818.1 | ABK71307.1 | MSMEG_1287 | MSMEG_1286 | Similar to Streptomyces cyclase/dehydrase superfamily protein; identified by match to protein family HMM PF03364. | Identified by match to protein family HMM PF00884. | 0.807 |
| ABK71818.1 | ABK72620.1 | MSMEG_1287 | MSMEG_1288 | Similar to Streptomyces cyclase/dehydrase superfamily protein; identified by match to protein family HMM PF03364. | Conserved hypothetical protein. | 0.518 |
| ABK71818.1 | ABK75566.1 | MSMEG_1287 | MSMEG_1285 | Similar to Streptomyces cyclase/dehydrase superfamily protein; identified by match to protein family HMM PF03364. | Identified by match to protein family HMM PF02810; match to protein family HMM PF07721. | 0.718 |
| ABK71856.1 | ABK72620.1 | MSMEG_1952 | MSMEG_1288 | ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580. | Conserved hypothetical protein. | 0.558 |
| ABK71856.1 | ABK73907.1 | MSMEG_1952 | MSMEG_5935 | ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580. | ATP-dependent DNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614. | 0.505 |
| ABK71856.1 | ABK75618.1 | MSMEG_1952 | MSMEG_5004 | ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580. | DNA repair exonuclease; Identified by match to protein family HMM PF00149. | 0.975 |
| ABK71856.1 | rnc | MSMEG_1952 | MSMEG_2418 | ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the all rRNAs (23S, 16S and 5S) (Probable). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | 0.492 |
| ABK72017.1 | ABK70583.1 | MSMEG_0868 | MSMEG_3937 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.716 |
| ABK72017.1 | ABK72620.1 | MSMEG_0868 | MSMEG_1288 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.476 |
| ABK72017.1 | ABK75566.1 | MSMEG_0868 | MSMEG_1285 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF02810; match to protein family HMM PF07721. | 0.516 |
| ABK72620.1 | ABK70095.1 | MSMEG_1288 | MSMEG_2778 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00570; match to protein family HMM PF01612. | 0.454 |
| ABK72620.1 | ABK70583.1 | MSMEG_1288 | MSMEG_3937 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.457 |
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