Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69937.1 | ABK70501.1 | MSMEG_1301 | MSMEG_6591 | NanT3; Identified by match to protein family HMM PF00196. | Aminotransferase, class V family protein; Identified by match to protein family HMM PF00266. | 0.415 |
ABK69937.1 | ABK70984.1 | MSMEG_1301 | MSMEG_1300 | NanT3; Identified by match to protein family HMM PF00196. | Hypothetical protein; Identified by Glimmer2; putative. | 0.458 |
ABK69937.1 | ABK72006.1 | MSMEG_1301 | MSMEG_1302 | NanT3; Identified by match to protein family HMM PF00196. | Alkylphosphonate uptake protein. | 0.431 |
ABK69937.1 | ABK72398.1 | MSMEG_1301 | MSMEG_0019 | NanT3; Identified by match to protein family HMM PF00196. | Amino acid adenylation; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733. | 0.439 |
ABK69937.1 | ABK72591.1 | MSMEG_1301 | MSMEG_3718 | NanT3; Identified by match to protein family HMM PF00196. | Conserved hypothetical protein; Identified by match to protein family HMM PF06803. | 0.432 |
ABK69937.1 | ABK73468.1 | MSMEG_1301 | MSMEG_4431 | NanT3; Identified by match to protein family HMM PF00196. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.492 |
ABK69937.1 | ABK73817.1 | MSMEG_1301 | MSMEG_5602 | NanT3; Identified by match to protein family HMM PF00196. | Conserved hypothetical protein. | 0.423 |
ABK69937.1 | ABK73911.1 | MSMEG_1301 | MSMEG_1691 | NanT3; Identified by match to protein family HMM PF00196. | Transcriptional regulatory protein; Identified by match to protein family HMM PF00196. | 0.495 |
ABK69937.1 | ABK73961.1 | MSMEG_1301 | MSMEG_1938 | NanT3; Identified by match to protein family HMM PF00196. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR02569. | 0.422 |
ABK69937.1 | ABK75465.1 | MSMEG_1301 | MSMEG_6828 | NanT3; Identified by match to protein family HMM PF00196. | Transcriptional regulator; Identified by match to protein family HMM PF00196. | 0.493 |
ABK70501.1 | ABK69937.1 | MSMEG_6591 | MSMEG_1301 | Aminotransferase, class V family protein; Identified by match to protein family HMM PF00266. | NanT3; Identified by match to protein family HMM PF00196. | 0.415 |
ABK70984.1 | ABK69937.1 | MSMEG_1300 | MSMEG_1301 | Hypothetical protein; Identified by Glimmer2; putative. | NanT3; Identified by match to protein family HMM PF00196. | 0.458 |
ABK72006.1 | ABK69937.1 | MSMEG_1302 | MSMEG_1301 | Alkylphosphonate uptake protein. | NanT3; Identified by match to protein family HMM PF00196. | 0.431 |
ABK72398.1 | ABK69937.1 | MSMEG_0019 | MSMEG_1301 | Amino acid adenylation; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733. | NanT3; Identified by match to protein family HMM PF00196. | 0.439 |
ABK72591.1 | ABK69937.1 | MSMEG_3718 | MSMEG_1301 | Conserved hypothetical protein; Identified by match to protein family HMM PF06803. | NanT3; Identified by match to protein family HMM PF00196. | 0.432 |
ABK73468.1 | ABK69937.1 | MSMEG_4431 | MSMEG_1301 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | NanT3; Identified by match to protein family HMM PF00196. | 0.492 |
ABK73817.1 | ABK69937.1 | MSMEG_5602 | MSMEG_1301 | Conserved hypothetical protein. | NanT3; Identified by match to protein family HMM PF00196. | 0.423 |
ABK73911.1 | ABK69937.1 | MSMEG_1691 | MSMEG_1301 | Transcriptional regulatory protein; Identified by match to protein family HMM PF00196. | NanT3; Identified by match to protein family HMM PF00196. | 0.495 |
ABK73961.1 | ABK69937.1 | MSMEG_1938 | MSMEG_1301 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR02569. | NanT3; Identified by match to protein family HMM PF00196. | 0.422 |
ABK75465.1 | ABK69937.1 | MSMEG_6828 | MSMEG_1301 | Transcriptional regulator; Identified by match to protein family HMM PF00196. | NanT3; Identified by match to protein family HMM PF00196. | 0.493 |