STRINGSTRING
ABK69937.1 ABK69937.1 ABK73911.1 ABK73911.1 ABK75465.1 ABK75465.1 ABK73468.1 ABK73468.1 ABK70984.1 ABK70984.1 ABK72398.1 ABK72398.1 ABK72591.1 ABK72591.1 ABK72006.1 ABK72006.1 ABK73817.1 ABK73817.1 ABK73961.1 ABK73961.1 ABK70501.1 ABK70501.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69937.1NanT3; Identified by match to protein family HMM PF00196. (86 aa)    
Predicted Functional Partners:
ABK73911.1
Transcriptional regulatory protein; Identified by match to protein family HMM PF00196.
  
 
 0.495
ABK75465.1
Transcriptional regulator; Identified by match to protein family HMM PF00196.
  
 
 0.493
ABK73468.1
Putative regulatory protein; Identified by match to protein family HMM PF00196.
  
 
 0.492
ABK70984.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.458
ABK72398.1
Amino acid adenylation; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733.
  
  
 0.439
ABK72591.1
Conserved hypothetical protein; Identified by match to protein family HMM PF06803.
 
    0.432
ABK72006.1
Alkylphosphonate uptake protein.
  
    0.431
ABK73817.1
Conserved hypothetical protein.
 
    0.423
ABK73961.1
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02569.
 
    0.422
ABK70501.1
Aminotransferase, class V family protein; Identified by match to protein family HMM PF00266.
  
    0.415
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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