STRINGSTRING
ABK70505.1 ABK70505.1 ABK75770.1 ABK75770.1 ABK75351.1 ABK75351.1 prfC prfC ABK69984.1 ABK69984.1 ABK70783.1 ABK70783.1 ABK73885.1 ABK73885.1 ABK74838.1 ABK74838.1 ABK73625.1 ABK73625.1 ABK72746.1 ABK72746.1 ABK74262.1 ABK74262.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70505.1Hypothetical protein; Identified by Glimmer2; putative. (249 aa)    
Predicted Functional Partners:
ABK75770.1
Identified by match to protein family HMM PF01341; Belongs to the glycosyl hydrolase family 6.
  
 
 0.444
ABK75351.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
  
 0.442
prfC
Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.
  
    0.437
ABK69984.1
Conserved integral membrane protein; Identified by match to protein family HMM PF01757.
  
 
 0.436
ABK70783.1
Lipolytic enzyme, G-D-S-L; Identified by match to protein family HMM PF00657.
  
 
 0.435
ABK73885.1
Conserved hypothetical protein, putative; Identified by match to protein family HMM PF00657.
  
 
 0.434
ABK74838.1
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.434
ABK73625.1
Conserved hypothetical protein.
  
 
 0.432
ABK72746.1
Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.
  
 
 0.431
ABK74262.1
Conserved hypothetical protein, putative; Identified by match to protein family HMM PF00657.
  
 
 0.431
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.