Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69583.1 | ABK72225.1 | MSMEG_6588 | MSMEG_1321 | Fumarylacetoacetate; Identified by match to protein family HMM PF01557. | 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557. | 0.765 |
| ABK69583.1 | ABK72679.1 | MSMEG_6588 | MSMEG_1906 | Fumarylacetoacetate; Identified by match to protein family HMM PF01557. | Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021. | 0.449 |
| ABK69583.1 | ABK73929.1 | MSMEG_6588 | MSMEG_6647 | Fumarylacetoacetate; Identified by match to protein family HMM PF01557. | Citrate synthase 2; Identified by match to protein family HMM PF00285; match to protein family HMM TIGR01800; Belongs to the citrate synthase family. | 0.407 |
| ABK69583.1 | hmgA | MSMEG_6588 | MSMEG_2075 | Fumarylacetoacetate; Identified by match to protein family HMM PF01557. | Homogentisate 1,2-dioxygenase; Identified by match to protein family HMM PF04209. | 0.573 |
| ABK69583.1 | ligD-2 | MSMEG_6588 | MSMEG_5570 | Fumarylacetoacetate; Identified by match to protein family HMM PF01557. | DNA ligase; With Ku forms a non-homologous end joining (NHEJ) repair enzyme which repairs blunt-end and 5'-overhang DNA double strand breaks (DSB) with about 50% fidelity, and DSB with non-complementary 3' ends. Plays a partial role in NHEJ during 3'-overhang repair. NHEJ repairs DSB with blunt ends and 5' overhangs with a high level of nucleotide insertion/deletion, without a need for microhomology. Acts as a DNA ligase on singly nicked dsDNA, as a DNA-directed DNA polymerase on 5' overhangs, and adds non-templated nucleotides to 3' overhangs (terminal transferase). Fills in gaps in d [...] | 0.428 |
| ABK71590.1 | ABK72225.1 | MSMEG_1317 | MSMEG_1321 | Transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557. | 0.479 |
| ABK71590.1 | ABK75093.1 | MSMEG_1317 | MSMEG_1319 | Transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Asp/Glu racemase; Identified by match to protein family HMM PF01177. | 0.618 |
| ABK71590.1 | ABK75757.1 | MSMEG_1317 | MSMEG_1318 | Transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Identified by match to protein family HMM PF01522. | 0.637 |
| ABK71590.1 | ABK76174.1 | MSMEG_1317 | MSMEG_1320 | Transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF07690. | 0.670 |
| ABK72225.1 | ABK69583.1 | MSMEG_1321 | MSMEG_6588 | 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557. | Fumarylacetoacetate; Identified by match to protein family HMM PF01557. | 0.765 |
| ABK72225.1 | ABK71590.1 | MSMEG_1321 | MSMEG_1317 | 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557. | Transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.479 |
| ABK72225.1 | ABK72679.1 | MSMEG_1321 | MSMEG_1906 | 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557. | Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021. | 0.452 |
| ABK72225.1 | ABK73659.1 | MSMEG_1321 | MSMEG_1322 | 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557. | Identified by match to protein family HMM PF03734. | 0.476 |
| ABK72225.1 | ABK73929.1 | MSMEG_1321 | MSMEG_6647 | 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557. | Citrate synthase 2; Identified by match to protein family HMM PF00285; match to protein family HMM TIGR01800; Belongs to the citrate synthase family. | 0.412 |
| ABK72225.1 | ABK75093.1 | MSMEG_1321 | MSMEG_1319 | 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557. | Asp/Glu racemase; Identified by match to protein family HMM PF01177. | 0.554 |
| ABK72225.1 | ABK75757.1 | MSMEG_1321 | MSMEG_1318 | 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557. | Identified by match to protein family HMM PF01522. | 0.571 |
| ABK72225.1 | ABK76174.1 | MSMEG_1321 | MSMEG_1320 | 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557. | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF07690. | 0.586 |
| ABK72225.1 | hmgA | MSMEG_1321 | MSMEG_2075 | 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557. | Homogentisate 1,2-dioxygenase; Identified by match to protein family HMM PF04209. | 0.573 |
| ABK72225.1 | ligD-2 | MSMEG_1321 | MSMEG_5570 | 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557. | DNA ligase; With Ku forms a non-homologous end joining (NHEJ) repair enzyme which repairs blunt-end and 5'-overhang DNA double strand breaks (DSB) with about 50% fidelity, and DSB with non-complementary 3' ends. Plays a partial role in NHEJ during 3'-overhang repair. NHEJ repairs DSB with blunt ends and 5' overhangs with a high level of nucleotide insertion/deletion, without a need for microhomology. Acts as a DNA ligase on singly nicked dsDNA, as a DNA-directed DNA polymerase on 5' overhangs, and adds non-templated nucleotides to 3' overhangs (terminal transferase). Fills in gaps in d [...] | 0.428 |
| ABK72679.1 | ABK69583.1 | MSMEG_1906 | MSMEG_6588 | Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021. | Fumarylacetoacetate; Identified by match to protein family HMM PF01557. | 0.449 |
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