Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70338.1 | ABK70537.1 | MSMEG_1348 | MSMEG_1350 | RNA polymerase ECF-subfamily protein sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | Cyclopropane-fatty-acyl-phospholipid synthase 1; Identified by match to protein family HMM PF02353. | 0.515 |
| ABK70338.1 | ABK71020.1 | MSMEG_1348 | MSMEG_1349 | RNA polymerase ECF-subfamily protein sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | Identified by match to protein family HMM PF04946. | 0.952 |
| ABK70338.1 | ABK72129.1 | MSMEG_1348 | MSMEG_5680 | RNA polymerase ECF-subfamily protein sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | Identified by match to protein family HMM PF00903. | 0.473 |
| ABK70338.1 | ABK72365.1 | MSMEG_1348 | MSMEG_1100 | RNA polymerase ECF-subfamily protein sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | Dgpf protein; Identified by match to protein family HMM PF04946. | 0.757 |
| ABK70338.1 | ABK75527.1 | MSMEG_1348 | MSMEG_6762 | RNA polymerase ECF-subfamily protein sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | Transcriptional regulator; Identified by match to protein family HMM PF01022. | 0.457 |
| ABK70537.1 | ABK70338.1 | MSMEG_1350 | MSMEG_1348 | Cyclopropane-fatty-acyl-phospholipid synthase 1; Identified by match to protein family HMM PF02353. | RNA polymerase ECF-subfamily protein sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | 0.515 |
| ABK70537.1 | ABK71020.1 | MSMEG_1350 | MSMEG_1349 | Cyclopropane-fatty-acyl-phospholipid synthase 1; Identified by match to protein family HMM PF02353. | Identified by match to protein family HMM PF04946. | 0.532 |
| ABK70957.1 | ABK71020.1 | MSMEG_4729 | MSMEG_1349 | Conserved hypothetical protein. | Identified by match to protein family HMM PF04946. | 0.479 |
| ABK70957.1 | ABK71204.1 | MSMEG_4729 | MSMEG_0391 | Conserved hypothetical protein. | Rmt3 protein. | 0.760 |
| ABK70957.1 | ABK73468.1 | MSMEG_4729 | MSMEG_4431 | Conserved hypothetical protein. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.503 |
| ABK71020.1 | ABK70338.1 | MSMEG_1349 | MSMEG_1348 | Identified by match to protein family HMM PF04946. | RNA polymerase ECF-subfamily protein sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | 0.952 |
| ABK71020.1 | ABK70537.1 | MSMEG_1349 | MSMEG_1350 | Identified by match to protein family HMM PF04946. | Cyclopropane-fatty-acyl-phospholipid synthase 1; Identified by match to protein family HMM PF02353. | 0.532 |
| ABK71020.1 | ABK70957.1 | MSMEG_1349 | MSMEG_4729 | Identified by match to protein family HMM PF04946. | Conserved hypothetical protein. | 0.479 |
| ABK71020.1 | ABK71204.1 | MSMEG_1349 | MSMEG_0391 | Identified by match to protein family HMM PF04946. | Rmt3 protein. | 0.664 |
| ABK71020.1 | ABK72129.1 | MSMEG_1349 | MSMEG_5680 | Identified by match to protein family HMM PF04946. | Identified by match to protein family HMM PF00903. | 0.483 |
| ABK71020.1 | ABK72365.1 | MSMEG_1349 | MSMEG_1100 | Identified by match to protein family HMM PF04946. | Dgpf protein; Identified by match to protein family HMM PF04946. | 0.488 |
| ABK71020.1 | ABK73468.1 | MSMEG_1349 | MSMEG_4431 | Identified by match to protein family HMM PF04946. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.506 |
| ABK71020.1 | ABK73813.1 | MSMEG_1349 | MSMEG_6680 | Identified by match to protein family HMM PF04946. | Integral membrane protein; Identified by match to protein family HMM PF04224. | 0.503 |
| ABK71020.1 | ABK75527.1 | MSMEG_1349 | MSMEG_6762 | Identified by match to protein family HMM PF04946. | Transcriptional regulator; Identified by match to protein family HMM PF01022. | 0.456 |
| ABK71020.1 | ecf | MSMEG_1349 | MSMEG_0405 | Identified by match to protein family HMM PF04946. | Extra cytoplasmic sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | 0.754 |
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