STRINGSTRING
ABK72637.1 ABK72637.1 ABK75788.1 ABK75788.1 ABK76029.1 ABK76029.1 ABK69760.1 ABK69760.1 ABK69638.1 ABK69638.1 ABK75271.1 ABK75271.1 ABK70734.1 ABK70734.1 ABK74273.1 ABK74273.1 ABK72341.1 ABK72341.1 ABK72976.1 ABK72976.1 ABK71661.1 ABK71661.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72637.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (199 aa)    
Predicted Functional Partners:
ABK75788.1
Conserved hypothetical protein.
 
    0.598
ABK76029.1
Conserved hypothetical protein.
 
    0.581
ABK69760.1
Conserved hypothetical protein.
  
 
 0.492
ABK69638.1
Conserved hypothetical protein.
 
     0.485
ABK75271.1
Conserved hypothetical protein.
 
    0.474
ABK70734.1
Conserved hypothetical protein.
 
    0.466
ABK74273.1
Bifunctional wax ester synthase/acyl-CoA diacylglycerol acyltransferase; Identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; Belongs to the long-chain O-acyltransferase family.
 
    0.450
ABK72341.1
Anaerobic dehydrogenase, typically; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.441
ABK72976.1
Metal-dependent hydrolase.
 
     0.431
ABK71661.1
Conserved hypothetical protein.
 
    0.425
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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