Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69548.1 | ABK69654.1 | MSMEG_1360 | MSMEG_1363 | Endonuclease/exonuclease/phosphatase; Identified by match to protein family HMM PF03372. | Glucokinase; Identified by match to protein family HMM PF00480. | 0.789 |
ABK69548.1 | ABK72401.1 | MSMEG_1360 | MSMEG_1358 | Endonuclease/exonuclease/phosphatase; Identified by match to protein family HMM PF03372. | Conserved hypothetical protein. | 0.917 |
ABK69548.1 | ABK74803.1 | MSMEG_1360 | MSMEG_1361 | Endonuclease/exonuclease/phosphatase; Identified by match to protein family HMM PF03372. | Alpha-mannosidase; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748. | 0.772 |
ABK69548.1 | ABK75638.1 | MSMEG_1360 | MSMEG_1362 | Endonuclease/exonuclease/phosphatase; Identified by match to protein family HMM PF03372. | Conserved hypothetical protein. | 0.874 |
ABK69654.1 | ABK69548.1 | MSMEG_1363 | MSMEG_1360 | Glucokinase; Identified by match to protein family HMM PF00480. | Endonuclease/exonuclease/phosphatase; Identified by match to protein family HMM PF03372. | 0.789 |
ABK69654.1 | ABK72401.1 | MSMEG_1363 | MSMEG_1358 | Glucokinase; Identified by match to protein family HMM PF00480. | Conserved hypothetical protein. | 0.585 |
ABK69654.1 | ABK74803.1 | MSMEG_1363 | MSMEG_1361 | Glucokinase; Identified by match to protein family HMM PF00480. | Alpha-mannosidase; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748. | 0.896 |
ABK69654.1 | ABK75638.1 | MSMEG_1363 | MSMEG_1362 | Glucokinase; Identified by match to protein family HMM PF00480. | Conserved hypothetical protein. | 0.883 |
ABK70567.1 | ABK72401.1 | MSMEG_2376 | MSMEG_1358 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.537 |
ABK72401.1 | ABK69548.1 | MSMEG_1358 | MSMEG_1360 | Conserved hypothetical protein. | Endonuclease/exonuclease/phosphatase; Identified by match to protein family HMM PF03372. | 0.917 |
ABK72401.1 | ABK69654.1 | MSMEG_1358 | MSMEG_1363 | Conserved hypothetical protein. | Glucokinase; Identified by match to protein family HMM PF00480. | 0.585 |
ABK72401.1 | ABK70567.1 | MSMEG_1358 | MSMEG_2376 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.537 |
ABK72401.1 | ABK72815.1 | MSMEG_1358 | MSMEG_6129 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.440 |
ABK72401.1 | ABK74803.1 | MSMEG_1358 | MSMEG_1361 | Conserved hypothetical protein. | Alpha-mannosidase; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748. | 0.582 |
ABK72401.1 | ABK75526.1 | MSMEG_1358 | MSMEG_1802 | Conserved hypothetical protein. | ChaB protein; Identified by match to protein family HMM PF06150. | 0.662 |
ABK72401.1 | ABK75638.1 | MSMEG_1358 | MSMEG_1362 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.683 |
ABK72815.1 | ABK72401.1 | MSMEG_6129 | MSMEG_1358 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.440 |
ABK74803.1 | ABK69548.1 | MSMEG_1361 | MSMEG_1360 | Alpha-mannosidase; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748. | Endonuclease/exonuclease/phosphatase; Identified by match to protein family HMM PF03372. | 0.772 |
ABK74803.1 | ABK69654.1 | MSMEG_1361 | MSMEG_1363 | Alpha-mannosidase; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748. | Glucokinase; Identified by match to protein family HMM PF00480. | 0.896 |
ABK74803.1 | ABK72401.1 | MSMEG_1361 | MSMEG_1358 | Alpha-mannosidase; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748. | Conserved hypothetical protein. | 0.582 |
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