STRINGSTRING
ABK72401.1 ABK72401.1 ABK69548.1 ABK69548.1 ABK75638.1 ABK75638.1 ABK75526.1 ABK75526.1 ABK69654.1 ABK69654.1 ABK74803.1 ABK74803.1 ABK70567.1 ABK70567.1 ABK72815.1 ABK72815.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72401.1Conserved hypothetical protein. (186 aa)    
Predicted Functional Partners:
ABK69548.1
Endonuclease/exonuclease/phosphatase; Identified by match to protein family HMM PF03372.
 
    0.917
ABK75638.1
Conserved hypothetical protein.
  
    0.683
ABK75526.1
ChaB protein; Identified by match to protein family HMM PF06150.
  
    0.662
ABK69654.1
Glucokinase; Identified by match to protein family HMM PF00480.
  
    0.585
ABK74803.1
Alpha-mannosidase; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.
  
    0.582
ABK70567.1
Conserved hypothetical protein.
  
    0.537
ABK72815.1
Conserved hypothetical protein.
  
    0.440
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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