STRINGSTRING
ABK72048.1 ABK72048.1 ABK70317.1 ABK70317.1 ABK71844.1 ABK71844.1 ABK73721.1 ABK73721.1 ABK71165.1 ABK71165.1 ABK71347.1 ABK71347.1 ABK74509.1 ABK74509.1 ABK70442.1 ABK70442.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72048.1DeoR-family protein transcriptional regulator; Identified by match to protein family HMM PF02082; match to protein family HMM PF08220. (320 aa)    
Predicted Functional Partners:
ABK70317.1
Conserved hypothetical protein.
 
    0.720
ABK71844.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04978.
 
     0.693
ABK73721.1
AraC family protein transcriptional regulator.
 
    0.552
ABK71165.1
Putative transcriptional regulator.
 
    0.505
ABK71347.1
Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022.
 
     0.444
ABK74509.1
Conserved hypothetical protein.
 
    0.430
ABK70442.1
PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.
  
  
 0.406
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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