STRINGSTRING
ABK69548.1 ABK69548.1 ABK72401.1 ABK72401.1 ABK75638.1 ABK75638.1 ABK69654.1 ABK69654.1 ABK74803.1 ABK74803.1 egtE egtE ABK70501.1 ABK70501.1 ABK74166.1 ABK74166.1 ABK75064.1 ABK75064.1 ABK69778.1 ABK69778.1 ABK74617.1 ABK74617.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ABK69548.1Endonuclease/exonuclease/phosphatase; Identified by match to protein family HMM PF03372. (249 aa)    
Predicted Functional Partners:
ABK72401.1
Conserved hypothetical protein.
 
    0.917
ABK75638.1
Conserved hypothetical protein.
  
    0.874
ABK69654.1
Glucokinase; Identified by match to protein family HMM PF00480.
  
    0.789
ABK74803.1
Alpha-mannosidase; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.
  
  
 0.772
egtE
Pyridoxal-phosphate-dependent transferase; Probably catalyzes the conversion of hercynylcysteine sulfoxide to ergothioneine. Ergothioneine is a secreted antioxidant that protects mycobacterium from oxidative stress. Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. EgtE subfamily.
 
   0.712
ABK70501.1
Aminotransferase, class V family protein; Identified by match to protein family HMM PF00266.
  
   0.671
ABK74166.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
   0.670
ABK75064.1
Aminotransferase, class V superfamily protein; Identified by match to protein family HMM PF00266.
  
   0.669
ABK69778.1
Identified by match to protein family HMM PF00266; match to protein family HMM TIGR01976.
  
   0.669
ABK74617.1
Cysteine desulphurase, SufS; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR01979; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
   
   0.666
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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