STRINGSTRING
ABK72533.1 ABK72533.1 ABK71572.1 ABK71572.1 ABK72127.1 ABK72127.1 ABK72451.1 ABK72451.1 ABK73585.1 ABK73585.1 ABK74217.1 ABK74217.1 ABK71583.1 ABK71583.1 ABK75748.1 ABK75748.1 ABK71552.1 ABK71552.1 ABK73180.1 ABK73180.1 ABK71797.1 ABK71797.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72533.1ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (360 aa)    
Predicted Functional Partners:
ABK71572.1
ABC-transporter integral membrane protein; Identified by match to protein family HMM PF02405.
 0.988
ABK72127.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02405.
 0.988
ABK72451.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02405.
 0.988
ABK73585.1
ABC-transporter integral membrane protein; Identified by match to protein family HMM PF02405.
 
 0.987
ABK74217.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02405.
 
 0.987
ABK71583.1
ABC-transporter integral membrane protein; Identified by match to protein family HMM PF02405.
 
 0.987
ABK75748.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02405.
 
 0.987
ABK71552.1
ABC-transporter integral membrane protein; Identified by match to protein family HMM PF02405.
 
 0.987
ABK73180.1
TrnB2 protein; Identified by match to protein family HMM PF02405.
 
 0.987
ABK71797.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02405.
 0.986
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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