STRINGSTRING
ABK69758.1 ABK69758.1 ABK72467.1 ABK72467.1 ABK74411.1 ABK74411.1 ABK73292.1 ABK73292.1 ABK72609.1 ABK72609.1 ABK70099.1 ABK70099.1 ABK70243.1 ABK70243.1 ABK70070.1 ABK70070.1 ABK74623.1 ABK74623.1 ABK71633.1 ABK71633.1 galK galK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69758.1LacI-family protein transcriptional regulator; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. (349 aa)    
Predicted Functional Partners:
ABK72467.1
Periplasmic binding proteins and sugar binding domain of the LacI family protein, putative; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
  
    0.771
ABK74411.1
Multiphosphoryl transfer protein (MTP); Identified by match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF03610; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; match to protein family HMM TIGR02364; Belongs to the PEP-utilizing enzyme family.
  
 
 0.748
ABK73292.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.685
ABK72609.1
Ribose ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF00532.
 
  
 0.676
ABK70099.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
   
 
 0.676
ABK70243.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
   
 
 0.676
ABK70070.1
Conserved hypothetical protein.
 
  
 0.634
ABK74623.1
ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.
  
  
 0.615
ABK71633.1
2-deoxy-scyllo-inosamine dehydrogenase; Identified by match to protein family HMM PF00107.
  
 
 0.611
galK
Galactokinase; Identified by match to protein family HMM PF00288; match to protein family HMM TIGR00131; Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.418
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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