STRINGSTRING
ABK74505.1 ABK74505.1 ABK73149.1 ABK73149.1 ABK74928.1 ABK74928.1 ABK72458.1 ABK72458.1 ABK72966.1 ABK72966.1 ABK71294.1 ABK71294.1 ABK71456.1 ABK71456.1 ABK72927.1 ABK72927.1 ABK69745.1 ABK69745.1 ABK71478.1 ABK71478.1 ABK70665.1 ABK70665.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABK74505.1Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
ABK73149.1
Alcohol dehydrogenase, class IV; Identified by match to protein family HMM PF00465.
 
  
 0.650
ABK74928.1
Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
  
    0.587
ABK72458.1
Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
    0.538
ABK72966.1
Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
    0.522
ABK71294.1
LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
    0.522
ABK71456.1
Putative transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
    0.503
ABK72927.1
Transcriptional regulator; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
  
    0.482
ABK69745.1
Transcriptional regulator LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
    0.459
ABK71478.1
LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
    0.444
ABK70665.1
Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
     0.441
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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