STRINGSTRING
ABK70441.1 ABK70441.1 ABK70238.1 ABK70238.1 rplS rplS ABK75913.1 ABK75913.1 ABK75522.1 ABK75522.1 ABK75418.1 ABK75418.1 ABK75772.1 ABK75772.1 eccB1 eccB1 saeA saeA ABK70482.1 ABK70482.1 ABK72069.1 ABK72069.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70441.1LprB protein. (173 aa)    
Predicted Functional Partners:
ABK70238.1
Lipoprotein, putative.
 
    0.949
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
  
   0.785
ABK75913.1
Putative membrane protein.
  
    0.747
ABK75522.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05976.
 
    0.746
ABK75418.1
Carbohydrate kinase, PfkB, putative; Identified by match to protein family HMM PF00294.
 
    0.711
ABK75772.1
Conserved hypothetical protein.
 
   
 0.709
eccB1
Conserved hypothetical protein; An ATPase (shown for residues 72-479). Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Plays a role in DNA conjugation, in both donor and recipient strains ; Belongs to the EccB family.
  
    0.702
saeA
Hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) but not donor (mc(2)155) strain.
  
    0.701
ABK70482.1
LprC protein.
 
    0.698
ABK72069.1
Conserved hypothetical protein.
  
  
 0.698
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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